Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 6.5e-135 484.2 267 100.0
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 3.4e-107 392.1 269 85.5
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 9.2e-105 384.0 269 84.8
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 2.8e-85 319.3 274 72.6
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 3.4e-67 259.2 270 64.4
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 3.6e-16 89.7 319 30.4
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 4.0e-15 86.3 358 30.7
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 8.8e-15 85.1 369 28.7
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 3.4e-14 83.2 369 28.5
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 1.4e-12 77.8 310 31.3
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.8e-12 77.4 343 28.9
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 1.2e-11 74.7 297 33.3
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 5.9e-11 72.4 377 29.4
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 5.9e-11 72.4 377 30.0
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 7.7e-11 72.0 363 27.5
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 1.0e-10 71.6 334 29.0
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.7e-10 70.9 331 27.2
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 2.9e-10 70.1 336 28.3
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 3.8e-10 69.7 306 26.8
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 6.5e-10 68.9 295 29.2
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 6.5e-10 68.9 310 27.7
Carub.0001s2776 Capsella rubella HOM05D008719 ORTHO05D010898 8.5e-10 68.6 278 32.0
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 1.1e-09 68.2 305 28.2
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 1.9e-09 67.4 277 32.5
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 1.9e-09 67.4 330 29.1
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 2.5e-09 67.0 317 30.0
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 4.2e-09 66.2 338 28.1
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 9.4e-09 65.1 377 31.0
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 2.1e-08 63.9 284 33.1
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.1e-08 63.9 317 29.7
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.8e-07 60.8 304 25.0
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.8e-07 60.8 304 25.0
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 2.3e-07 60.5 322 32.3
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 2.3e-07 60.5 345 25.8
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 4.0e-07 59.7 102 46.1
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 5.2e-07 59.3 98 45.9
Thhalv10008596m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 6.8e-07 58.9 284 30.6
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 8.8e-07 58.5 245 35.9
Gohir.A06G135400 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.2e-06 58.2 75 52.0
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 1.2e-06 58.2 339 32.4
SalBow7G0495 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.5e-06 57.8 92 44.6
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 2.6e-06 57.0 99 41.4
Medtr6g068870 Medicago truncatula HOM05D009013 ORTHO05D009761 5.7e-06 55.8 270 27.4
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 9.8e-06 55.1 373 26.5


User provided reference genes

Program Settings