Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G023900 Citrullus lanatus HOM05D005059 ORTHO05D004248 1.5e-40 169.1 87 100.0
Sed0013946 Sechium edule HOM05D005059 ORTHO05D004248 1.5e-16 89.4 87 65.5
Lsat_1_v5_gn_7_25601 Lactuca sativa HOM05D005059 ORTHO05D004248 8.1e-10 67.0 82 51.2
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 1.1e-09 66.6 53 64.2
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 1.1e-09 66.6 89 48.3
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 1.4e-09 66.2 89 49.4
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.8e-09 65.9 92 47.8
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 6.9e-09 63.9 55 60.0
Lj6g0009726 Lotus japonicus HOM05D005059 ORTHO05D004248 6.9e-09 63.9 93 47.3
Lalb_Chr15g0086331 Lupinus albus HOM05D005059 ORTHO05D004248 9.0e-09 63.5 57 59.6
CiPaw.09G073100 Carya illinoinensis HOM05D005059 ORTHO05D004248 2.6e-08 62.0 54 59.3
Psat7g068640 Pisum sativum HOM05D005059 ORTHO05D004248 2.6e-08 62.0 59 54.2
RcHm_v2.0_Chr5g0011661 Rosa chinensis HOM05D005059 ORTHO05D004248 2.6e-08 62.0 54 66.7
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 2.6e-08 62.0 98 45.9
MD00G1009200 Malus domestica HOM05D005059 ORTHO05D004248 3.4e-08 61.6 98 45.9
MD00G1221100 Malus domestica HOM05D005059 ORTHO05D004248 3.4e-08 61.6 98 45.9
Oeu040922.1 Olea europaea HOM05D005059 ORTHO05D004248 3.4e-08 61.6 81 48.1
MSTRG.13233 Avicennia marina HOM05D005059 ORTHO05D004248 4.4e-08 61.2 90 44.4
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 4.4e-08 61.2 55 60.0
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 9.9e-08 60.1 86 46.5
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 1.3e-07 59.7 85 45.9
Cc02_g15600 Coffea canephora HOM05D005059 ORTHO05D004248 1.3e-07 59.7 60 55.0
Phvul.006G173000 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.3e-07 59.7 86 48.8
DCAR_027980 Daucus carota HOM05D005059 ORTHO05D004248 1.7e-07 59.3 56 57.1
Glyma.15G085800 Glycine max HOM05D005059 ORTHO05D004248 1.7e-07 59.3 49 61.2
TPR.G6728 Trifolium pratense HOM05D005059 ORTHO05D004248 1.7e-07 59.3 52 57.7
Ciclev10018148m.g Citrus clementina HOM05D005059 ORTHO05D004248 2.2e-07 58.9 93 45.2
Migut.H01411 Erythranthe guttata HOM05D005059 ORTHO05D004248 2.2e-07 58.9 88 40.9
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 2.2e-07 58.9 87 44.8
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 2.2e-07 58.9 82 47.6
arahy.Tifrunner.gnm1.ann1.YXRF57 Arachis hypogaea HOM05D005059 ORTHO05D004248 2.9e-07 58.5 102 44.1
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 2.9e-07 58.5 53 60.4
arahy.Tifrunner.gnm1.ann1.YNVN02 Arachis hypogaea HOM05D005059 ORTHO05D004248 3.8e-07 58.2 101 43.6
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 3.8e-07 58.2 57 54.4
Prupe.4G067000 Prunus persica HOM05D005059 ORTHO05D004248 3.8e-07 58.2 101 40.6
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 4.9e-07 57.8 94 43.6
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 4.9e-07 57.8 83 47.0
SalBow8G0022 Salvia bowleyana HOM05D005059 ORTHO05D004248 4.9e-07 57.8 54 57.4
Ca_17896_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 6.4e-07 57.4 52 55.8
Dinv12752 Davidia involucrata HOM05D005059 ORTHO05D004248 6.4e-07 57.4 51 60.8
Glyma.13G226600 Glycine max HOM05D005059 ORTHO05D004248 6.4e-07 57.4 88 44.3
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 6.4e-07 57.4 53 60.4
BcaB07g32517 Brassica carinata HOM05D005059 ORTHO05D004248 1.1e-06 56.6 54 59.3
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 1.1e-06 56.6 94 43.6
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 1.1e-06 56.6 92 45.7
Oeu060173.1 Olea europaea HOM05D005059 ORTHO05D004248 1.1e-06 56.6 92 42.4
TWI53G1149 Tripterygium wilfordii HOM05D005059 ORTHO05D004248 1.1e-06 56.6 53 58.5
DCAR_005145 Daucus carota HOM05D005059 ORTHO05D004248 1.9e-06 55.8 103 39.8
FAN16G0464 Fragaria x ananassa HOM05D005059 ORTHO05D004248 1.9e-06 55.8 97 43.3
AL1G43080 Arabidopsis lyrata HOM05D005059 ORTHO05D004248 2.4e-06 55.5 53 58.5
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 2.4e-06 55.5 101 43.6
A09p37060 Brassica napus HOM05D005059 ORTHO05D004248 3.2e-06 55.1 54 57.4
BraA09t39221Z Brassica rapa HOM05D005059 ORTHO05D004248 3.2e-06 55.1 54 57.4
FvH4_3g07300 Fragaria vesca HOM05D005059 ORTHO05D004248 3.2e-06 55.1 97 42.3
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 3.2e-06 55.1 97 43.3
BcaC05g26955 Brassica carinata HOM05D005059 ORTHO05D004248 4.2e-06 54.7 54 57.4
C05p28050 Brassica napus HOM05D005059 ORTHO05D004248 4.2e-06 54.7 54 57.4
BolC5t31533H Brassica oleracea HOM05D005059 ORTHO05D004248 4.2e-06 54.7 54 57.4
CARHR028610 Cardamine hirsuta HOM05D005059 ORTHO05D004248 4.2e-06 54.7 53 56.6
FAN21G0043 Fragaria x ananassa HOM05D005059 ORTHO05D004248 4.2e-06 54.7 97 42.3
FAN25G1124 Fragaria x ananassa HOM05D005059 ORTHO05D004248 4.2e-06 54.7 97 42.3
Psat1g194640 Pisum sativum HOM05D005059 ORTHO05D004248 4.2e-06 54.7 96 39.6
SGA_v2.0_scaffold1G00085 Striga asiatica HOM05D005059 ORTHO05D004248 4.2e-06 54.7 54 55.6
Ca_00473_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 5.4e-06 54.3 57 49.1
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 5.4e-06 54.3 97 42.3
AT1G29290 Arabidopsis thaliana HOM05D005059 ORTHO05D004248 7.1e-06 53.9 53 56.6
A07p10740 Brassica napus HOM05D005059 ORTHO05D004248 7.1e-06 53.9 53 56.6
BraA07t28869Z Brassica rapa HOM05D005059 ORTHO05D004248 7.1e-06 53.9 53 56.6
Migut.M01008 Erythranthe guttata HOM05D005059 ORTHO05D004248 7.1e-06 53.9 46 56.5
BcaB03g13892 Brassica carinata HOM05D005059 ORTHO05D004248 9.3e-06 53.5 53 56.6
Sp1g25220 Schrenkiella parvula HOM05D005059 ORTHO05D004248 9.3e-06 53.5 53 56.6


User provided reference genes

Program Settings