Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 6.1e-106 387.5 196 100.0
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 7.7e-93 344.0 196 90.3
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 1.2e-80 303.5 197 82.7
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.1e-67 260.4 153 87.6
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.5e-64 250.0 203 66.5
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 4.9e-63 245.0 204 65.7
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 6.4e-63 244.6 192 70.8
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.4e-62 243.4 203 67.5
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 3.2e-62 242.3 202 66.8
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.2e-62 242.3 203 67.0
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 3.2e-62 242.3 195 67.2
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 3.2e-62 242.3 204 68.1
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 7.1e-62 241.1 200 67.5
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 7.1e-62 241.1 200 66.5
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 9.2e-62 240.7 157 79.0
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 9.2e-62 240.7 157 79.0
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.2e-61 240.4 201 68.2
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 1.2e-61 240.4 197 68.5
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 2.7e-61 239.2 157 78.3
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 3.5e-61 238.8 204 66.7
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 3.5e-61 238.8 200 69.0
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 6.0e-61 238.0 201 66.2
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 6.0e-61 238.0 198 66.7
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 7.8e-61 237.7 205 65.9
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.0e-60 237.3 156 78.8
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.0e-60 237.3 174 74.7
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.3e-60 236.9 201 66.2
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 1.3e-60 236.9 194 67.5
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 2.3e-60 236.1 197 66.0
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 3.9e-60 235.3 184 70.1
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 5.1e-60 235.0 203 65.0
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 6.6e-60 234.6 160 78.1
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 8.6e-60 234.2 187 69.5
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.1e-59 233.8 203 64.5
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.9e-59 233.0 172 73.3
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 3.3e-59 232.3 178 70.2
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 4.3e-59 231.9 159 76.7
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 4.3e-59 231.9 204 65.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 5.6e-59 231.5 161 73.9
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 5.6e-59 231.5 205 62.9
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 7.3e-59 231.1 156 76.9
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 7.3e-59 231.1 144 81.2
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 1.2e-58 230.3 167 73.1
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.2e-58 230.3 165 74.5
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 1.6e-58 229.9 142 82.4
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 2.8e-58 229.2 180 67.8
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 3.6e-58 228.8 124 87.9
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 4.7e-58 228.4 155 75.5
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 4.7e-58 228.4 200 67.0
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 8.1e-58 227.6 193 67.9
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.1e-57 227.3 197 64.5
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.1e-57 227.3 197 64.5
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.1e-57 227.3 122 91.8
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 1.4e-57 226.9 158 73.4
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.4e-57 226.9 200 64.5
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.4e-57 226.9 145 80.0
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.8e-57 226.5 168 69.6
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.8e-57 226.5 120 92.5
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 2.4e-57 226.1 125 88.0
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 3.1e-57 225.7 197 63.5
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 3.1e-57 225.7 122 91.0
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 4.0e-57 225.3 176 67.6
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 4.0e-57 225.3 194 64.9
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 4.0e-57 225.3 200 64.0
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 4.0e-57 225.3 203 61.1
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 5.2e-57 224.9 156 76.9
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 8.9e-57 224.2 162 74.7
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 8.9e-57 224.2 160 73.8
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 8.9e-57 224.2 122 89.3
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 2.6e-56 222.6 135 80.7
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 3.4e-56 222.2 148 77.0
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 3.4e-56 222.2 132 83.3
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 4.4e-56 221.9 139 80.6
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 7.6e-56 221.1 122 88.5
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 9.9e-56 220.7 134 80.6
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.3e-55 220.3 165 70.9
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.7e-55 219.9 122 87.7
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 3.8e-55 218.8 122 87.7
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.8e-55 218.8 189 61.4
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 4.9e-55 218.4 129 83.7
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 1.1e-54 217.2 134 79.1
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.4e-54 216.9 180 61.7
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 3.2e-54 215.7 124 83.1
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 3.2e-54 215.7 144 76.4
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 3.2e-54 215.7 122 86.1
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 4.2e-54 215.3 122 86.1
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 7.1e-54 214.5 156 69.2
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 9.2e-54 214.2 144 75.7
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.2e-53 213.8 239 53.1
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 2.7e-53 212.6 134 79.1
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 9.6e-51 204.1 132 73.5
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.2e-50 203.8 147 68.7
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.6e-50 203.4 159 67.9
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 3.6e-50 202.2 191 62.8
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 6.2e-50 201.4 121 76.9
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 5.3e-49 198.4 183 60.1
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 1.5e-48 196.8 128 75.8
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 3.8e-47 192.2 200 55.0
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 7.1e-46 188.0 137 67.9
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 6.0e-45 184.9 99 91.9
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 6.6e-44 181.4 122 73.0
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 2.4e-41 172.9 122 68.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.1e-41 172.6 123 65.9
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 5.3e-41 171.8 122 68.0
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 6.0e-37 158.3 106 71.7
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.5e-35 153.7 104 76.0
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 5.6e-35 151.8 151 57.6
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 6.2e-34 148.3 153 59.5
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 4.3e-27 125.6 142 49.3
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 9.6e-27 124.4 81 77.8
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.7e-26 122.5 133 55.6
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 6.0e-21 105.1 121 47.9
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.3e-20 104.0 153 48.4
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 3.7e-18 95.9 71 67.6
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.7e-15 87.0 45 88.9
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.9e-15 86.3 50 84.0
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.0e-15 85.5 96 55.2
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.9e-14 83.6 92 54.3
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.9e-14 83.6 92 54.3
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.7e-13 79.7 114 45.6
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 2.3e-12 76.6 37 91.9
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.0e-07 58.9 42 61.9
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 8.5e-07 58.2 52 57.7


User provided reference genes

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