Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 0.0e+00 1468.4 773 100.0
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 0.0e+00 1091.6 773 78.9
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 1.3e-279 966.5 865 66.5
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 1.1e-270 936.8 796 68.5
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 5.0e-87 326.6 811 35.4
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 8.3e-82 309.3 789 36.2
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.1e-78 298.9 816 33.6
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 3.6e-77 293.9 877 33.5
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 8.9e-76 289.3 834 32.6
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 3.4e-75 287.3 872 31.7
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 1.2e-72 278.9 817 31.7
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.0e-71 274.2 834 32.0
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 1.5e-70 271.9 808 32.5
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.9e-70 271.6 819 33.2
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.8e-68 265.0 838 31.9
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.4e-68 264.6 768 31.8
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.9e-66 256.9 856 31.2
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 9.3e-65 252.7 814 31.7
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 9.3e-65 252.7 797 32.0
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 3.5e-64 250.8 903 30.6
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.3e-63 248.8 827 30.8
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 3.0e-63 247.7 783 30.9
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 3.9e-63 247.3 826 30.3
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 2.5e-62 244.6 805 31.7
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 7.3e-62 243.0 961 29.4
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 6.9e-60 236.5 852 30.8
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 1.5e-59 235.3 846 29.8
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 5.8e-59 233.4 840 30.6
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 7.6e-59 233.0 459 38.1
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 7.6e-59 233.0 867 29.5
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 6.4e-58 229.9 848 30.2
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 2.4e-57 228.0 775 29.8
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 4.6e-56 223.8 821 29.1
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 1.9e-54 218.4 827 30.2
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 2.5e-54 218.0 850 29.1
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 4.3e-54 217.2 879 28.6
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 2.1e-53 214.9 789 27.8
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 4.8e-53 213.8 844 28.4
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 2.6e-51 208.0 814 27.4
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 2.6e-51 208.0 870 29.4
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.5e-51 207.2 811 28.9
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 5.4e-49 200.3 868 27.1
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 1.6e-48 198.7 784 28.4
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 3.5e-48 197.6 864 27.8
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 6.7e-47 193.4 752 29.3
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 4.0e-44 184.1 807 28.0
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 2.6e-43 181.4 813 27.9
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.7e-42 178.7 769 28.7
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 2.9e-42 177.9 786 27.1
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 3.9e-39 167.5 807 27.0
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 1.9e-38 165.2 807 28.6
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.3e-37 162.5 307 40.7
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 2.8e-37 161.4 776 27.7
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 2.8e-37 161.4 852 26.1
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 4.8e-37 160.6 746 26.5
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 2.4e-36 158.3 948 26.7
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 9.0e-36 156.4 810 27.2
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 1.5e-35 155.6 172 52.9
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 5.8e-35 153.7 737 27.4
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 7.6e-35 153.3 812 27.3
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.0e-34 152.9 888 25.9
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 8.4e-34 149.8 832 25.5
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 1.4e-33 149.1 826 25.5
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 1.6e-32 145.6 822 25.9
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 2.7e-32 144.8 720 24.6
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.9e-30 138.7 262 38.2
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.6e-29 135.6 215 41.9
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 1.5e-27 129.0 779 25.9
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 2.9e-26 124.8 891 24.7
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 5.0e-26 124.0 824 25.0
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 8.5e-26 123.2 372 31.7
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.5e-25 120.6 907 24.5
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 5.5e-25 120.6 256 36.3
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 9.4e-25 119.8 125 52.8
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 9.4e-25 119.8 233 36.9
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.2e-24 119.4 478 28.5
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 1.8e-23 115.5 908 24.7
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 1.8e-23 115.5 803 24.2
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.3e-23 115.2 756 25.5
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 6.7e-23 113.6 805 24.2
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.1e-22 112.8 882 24.1
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 7.4e-22 110.2 814 24.2
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 7.4e-22 110.2 148 45.9
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 1.3e-21 109.4 294 31.6
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 2.8e-21 108.2 879 24.2
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 6.3e-21 107.1 142 45.8
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 2.4e-20 105.1 158 42.4
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 5.3e-20 104.0 735 25.6
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 2.0e-19 102.1 753 25.2
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 1.7e-18 99.0 361 29.9
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 2.2e-18 98.6 120 49.2
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 5.0e-18 97.4 417 30.5
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 6.5e-18 97.1 149 39.6
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 1.1e-17 96.3 438 29.0
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 1.4e-17 95.9 876 23.4
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 2.5e-17 95.1 742 24.8
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 3.2e-17 94.7 285 29.8
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 5.5e-17 94.0 848 23.6
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 4.7e-16 90.9 142 39.4
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 7.9e-16 90.1 110 46.4
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 2.0e-14 85.5 84 53.6
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.8e-12 79.0 101 47.5
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 5.3e-12 77.4 111 45.9
QL05p044176 Quercus lobata HOM05D007489 ORTHO05D008037 1.5e-11 75.9 135 42.2
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 5.9e-11 73.9 205 38.0
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.3e-10 72.8 122 34.4
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 1.5e-09 69.3 149 36.2
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.9e-09 68.9 81 43.2
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 4.2e-09 67.8 65 55.4
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 5.5e-09 67.4 876 21.6
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 5.5e-09 67.4 63 49.2
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 7.2e-09 67.0 63 49.2
Eucgr.D00548 Eucalyptus grandis HOM05D007489 ORTHO05D008037 4.7e-08 64.3 76 50.0


User provided reference genes

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