Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G022190 Citrullus lanatus HOM05D004361 ORTHO05D004706 5.9e-98 360.9 188 100.0
CsaV3_6G049270 Cucumis sativus L. HOM05D004361 ORTHO05D004706 2.8e-60 235.7 195 69.7
MELO3C032917.2 Cucumis melo HOM05D004361 ORTHO05D004706 3.6e-47 192.2 165 69.7
Sed0009826 Sechium edule HOM05D004361 ORTHO05D004706 7.6e-21 104.8 173 47.4
Thecc.06G213600 Theobroma cacao HOM05D004361 ORTHO05D004706 3.1e-14 82.8 214 37.9
Sed0011498 Sechium edule HOM05D004361 ORTHO05D004706 1.2e-13 80.9 205 34.6
FAN21G0156 Fragaria x ananassa HOM05D004361 ORTHO05D004706 3.4e-13 79.3 203 33.5
Gohir.A06G208100 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.5e-13 79.0 201 32.8
FvH4_3g02690 Fragaria vesca HOM05D004361 ORTHO05D004706 7.6e-13 78.2 203 33.5
COL.COLO4_31721 Corchorus olitorius HOM05D004361 ORTHO05D004706 9.9e-13 77.8 216 34.7
FAN25G3407 Fragaria x ananassa HOM05D004361 ORTHO05D004706 1.3e-12 77.4 202 33.2
Sed0010653 Sechium edule HOM05D004361 ORTHO05D004706 2.2e-12 76.6 179 36.3
Cfa000279 Carpinus fangiana HOM05D004361 ORTHO05D004706 4.9e-12 75.5 198 36.9
Gohir.D06G213000 Gossypium hirsutum HOM05D004361 ORTHO05D004706 6.4e-12 75.1 190 32.6
Duzib192G0487 Durio zibethinus HOM05D004361 ORTHO05D004706 1.9e-11 73.6 209 34.0
MD05G1340800 Malus domestica HOM05D004361 ORTHO05D004706 3.2e-11 72.8 201 34.3
Gohir.A06G145600 Gossypium hirsutum HOM05D004361 ORTHO05D004706 4.2e-11 72.4 204 32.8
ClCG03G005000 Citrullus lanatus HOM05D004361 ORTHO05D004706 9.3e-11 71.2 197 35.0
Gorai.010G176700 Gossypium raimondii HOM05D004361 ORTHO05D004706 9.3e-11 71.2 204 32.8
Duzib235G0682 Durio zibethinus HOM05D004361 ORTHO05D004706 1.6e-10 70.5 203 32.0
MD10G1314300 Malus domestica HOM05D004361 ORTHO05D004706 2.7e-10 69.7 203 35.5
Gohir.D06G151500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 3.5e-10 69.3 204 32.4
Nitab4.5_0001686g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 3.5e-10 69.3 161 33.5
CsaV3_1G011080 Cucumis sativus L. HOM05D004361 ORTHO05D004706 4.6e-10 68.9 201 34.8
Cpa.g.sc198.2 Carica papaya HOM05D004361 ORTHO05D004706 1.3e-09 67.4 193 34.2
MSTRG.15964 Avicennia marina HOM05D004361 ORTHO05D004706 6.7e-09 65.1 194 30.4
Migut.M01277 Erythranthe guttata HOM05D004361 ORTHO05D004706 8.7e-09 64.7 207 34.8
Solyc02g080110.3 Solanum lycopersicum HOM05D004361 ORTHO05D004706 1.1e-08 64.3 183 33.3
MELO3C002485.2 Cucumis melo HOM05D004361 ORTHO05D004706 1.5e-08 63.9 200 32.5
Gorai.010G253100 Gossypium raimondii HOM05D004361 ORTHO05D004706 1.5e-08 63.9 207 30.4
Potri.004G023000 Populus trichocarpa HOM05D004361 ORTHO05D004706 3.3e-08 62.8 212 34.9
Gohir.A10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 5.6e-08 62.0 198 32.3
Nitab4.5_0002847g0010 Nicotiana tabacum HOM05D004361 ORTHO05D004706 1.3e-07 60.8 154 33.8
PGR004G2667 Punica granatum HOM05D004361 ORTHO05D004706 1.3e-07 60.8 170 31.8
Peaxi162Scf00678g00313 Petunia axillaris HOM05D004361 ORTHO05D004706 2.1e-07 60.1 169 32.5
Sabra04G0012700 Salix brachista HOM05D004361 ORTHO05D004706 2.8e-07 59.7 166 36.7
Potri.011G026900 Populus trichocarpa HOM05D004361 ORTHO05D004706 5.3e-06 55.5 185 34.6
CANSAT56G2280 Cannabis sativa HOM05D004361 ORTHO05D004706 9.0e-06 54.7 184 32.6


User provided reference genes

Program Settings