Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.6e-180 636.0 316 100.0
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.4e-144 516.5 274 93.1
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.5e-141 506.5 274 92.3
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 2.1e-140 502.7 275 93.1
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 7.3e-109 397.9 279 73.1
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 6.8e-107 391.3 283 72.8
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 4.4e-106 388.7 280 73.2
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 1.1e-104 384.0 283 72.4
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 7.1e-104 381.3 280 70.7
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 4.6e-103 378.6 281 70.8
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.5e-101 372.9 286 67.8
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 3.3e-101 372.5 281 71.2
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 4.3e-101 372.1 280 72.5
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 2.1e-100 369.8 275 70.5
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 2.1e-100 369.8 279 70.3
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 2.8e-100 369.4 288 71.9
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 6.2e-100 368.2 316 64.6
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 8.1e-100 367.9 278 69.1
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.4e-99 367.1 242 76.9
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 3.1e-99 365.9 280 70.7
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 6.8e-99 364.8 279 69.2
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 2.6e-98 362.8 283 67.8
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 3.4e-98 362.5 281 69.0
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.4e-98 362.5 226 80.1
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.4e-98 362.1 226 79.2
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 5.8e-98 361.7 270 71.1
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 5.8e-98 361.7 268 72.8
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 7.6e-98 361.3 286 66.4
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 3.7e-97 359.0 280 68.6
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 3.7e-97 359.0 280 68.2
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 3.7e-97 359.0 284 66.9
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.9e-96 356.7 288 67.4
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 1.9e-96 356.7 276 67.4
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 3.2e-96 355.9 270 69.6
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 5.4e-96 355.1 282 69.1
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 5.4e-96 355.1 284 68.3
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 5.4e-96 355.1 295 66.1
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.5e-95 352.4 298 64.8
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 4.6e-95 352.1 244 72.5
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 7.8e-95 351.3 279 65.9
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.0e-94 350.9 244 72.1
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.0e-94 350.9 243 72.0
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.3e-94 349.7 254 72.0
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.9e-94 349.0 295 65.1
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 6.6e-94 348.2 279 68.8
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 8.6e-94 347.8 284 66.2
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.1e-93 347.4 281 66.2
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 1.9e-93 346.7 283 67.1
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 4.3e-93 345.5 203 82.8
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 5.6e-93 345.1 281 67.3
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 1.2e-92 344.0 282 65.2
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.2e-92 344.0 285 64.6
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 2.8e-92 342.8 221 75.1
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.6e-92 342.4 281 65.1
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 4.7e-92 342.0 249 72.3
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 4.7e-92 342.0 282 64.5
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 6.2e-92 341.7 282 64.5
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.1e-91 340.9 283 64.7
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.1e-91 340.9 243 72.4
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 8.9e-91 337.8 278 65.5
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.2e-90 337.4 280 65.0
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.2e-90 337.4 277 65.0
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.0e-90 336.7 281 64.4
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 2.0e-90 336.7 194 82.0
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.6e-90 336.3 211 77.7
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 5.8e-90 335.1 282 63.5
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.7e-89 333.6 279 66.3
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.7e-89 333.6 280 62.9
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 4.9e-89 332.0 304 60.9
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 8.4e-89 331.3 248 67.7
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.1e-88 330.9 201 79.6
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.7e-87 326.2 249 68.7
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 3.5e-87 325.9 183 84.2
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 4.6e-87 325.5 278 64.7
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.7e-86 323.6 283 62.2
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 3.9e-86 322.4 202 77.7
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 3.3e-85 319.3 235 66.4
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 9.6e-85 317.8 182 84.1
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 2.1e-84 316.6 188 82.4
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 3.6e-84 315.8 198 76.8
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 8.1e-84 314.7 281 61.2
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.1e-83 314.3 201 74.6
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 2.4e-83 313.2 282 62.1
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 2.4e-83 313.2 282 62.1
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 2.4e-83 313.2 282 62.1
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.4e-83 313.2 248 66.5
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 3.1e-83 312.8 280 61.1
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 9.0e-83 311.2 281 62.3
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.2e-82 310.8 241 67.2
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.6e-82 309.7 205 75.6
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 7.6e-82 308.1 283 58.3
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 4.9e-81 305.4 245 66.1
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.4e-80 303.9 207 72.5
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.3e-78 296.6 283 59.0
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 3.4e-74 282.7 233 61.4
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 6.4e-73 278.5 274 58.0
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.1e-72 277.7 274 58.0
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 1.4e-72 277.3 166 80.1
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 4.8e-68 262.3 241 58.1
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 2.0e-66 256.9 185 65.4
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 4.2e-64 249.2 216 56.9
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.8e-52 209.1 121 82.6
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 1.5e-50 204.1 222 54.5
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 2.6e-50 203.4 178 57.3
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 2.0e-45 187.2 103 81.6
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.0e-33 148.3 94 78.7
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.5e-29 134.4 81 79.0
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 1.0e-25 121.7 135 50.4
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.5e-24 117.9 84 65.5
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.2e-24 116.7 96 64.6
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 3.2e-16 90.1 195 32.3
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 5.7e-13 79.3 103 42.7
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 3.1e-11 73.6 196 30.6
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.5e-08 64.7 35 88.6


User provided reference genes

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