Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 4.2e-105 384.8 210 100.0
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 4.0e-87 325.1 211 84.4
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 3.0e-82 308.9 213 81.7
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 1.6e-67 260.0 211 71.1
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.1e-56 223.0 213 61.0
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 1.1e-55 220.7 215 63.3
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 9.0e-55 217.6 218 61.9
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 2.6e-54 216.1 212 58.5
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 1.7e-53 213.4 210 58.6
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 4.9e-53 211.8 185 67.0
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 1.4e-52 210.3 212 60.4
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 2.4e-52 209.5 221 58.4
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 5.4e-52 208.4 215 60.5
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 9.3e-52 207.6 218 57.3
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 2.7e-51 206.1 201 62.7
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 6.0e-51 204.9 200 56.5
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 6.0e-51 204.9 217 58.5
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 7.8e-51 204.5 220 58.6
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 2.3e-50 203.0 218 56.4
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 3.9e-50 202.2 222 58.1
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 3.9e-50 202.2 183 64.5
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 8.7e-50 201.1 221 57.5
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 4.3e-49 198.7 183 63.9
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 5.6e-49 198.4 269 48.7
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.3e-48 197.2 213 60.1
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.3e-48 197.2 217 57.6
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.8e-48 196.1 218 54.6
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 3.6e-48 195.7 217 57.6
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 6.2e-48 194.9 227 52.4
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 8.1e-48 194.5 180 59.4
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.1e-47 194.1 218 53.7
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 3.1e-47 192.6 217 51.6
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 5.3e-47 191.8 212 56.6
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.5e-46 190.3 180 63.3
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.6e-46 189.5 215 57.7
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 2.6e-46 189.5 215 57.7
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 4.5e-46 188.7 212 54.7
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 5.8e-46 188.3 212 55.2
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 9.9e-46 187.6 212 54.7
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 1.7e-45 186.8 213 55.4
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 2.9e-45 186.0 181 61.9
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 6.4e-45 184.9 180 63.3
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 8.4e-45 184.5 177 59.9
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 1.9e-44 183.3 205 55.6
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 4.2e-44 182.2 187 60.4
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 3.0e-42 176.0 181 57.5
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 3.0e-42 176.0 219 54.8
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 1.5e-41 173.7 221 53.4
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 1.9e-41 173.3 189 56.6
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 1.9e-41 173.3 216 52.3
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 2.5e-41 172.9 213 53.1
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 3.3e-41 172.6 178 56.2
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 1.6e-40 170.2 219 53.4
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 2.1e-40 169.9 195 53.8
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 4.8e-40 168.7 210 53.8
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.8e-40 168.7 149 65.8
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 2.6e-38 162.9 161 60.9
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 5.8e-38 161.8 196 56.6
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 5.8e-38 161.8 178 53.9
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 2.2e-37 159.8 193 58.5
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 2.2e-37 159.8 193 58.5
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 3.8e-37 159.1 223 48.4
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 4.9e-37 158.7 154 63.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 8.4e-37 157.9 174 54.0
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 8.4e-37 157.9 153 62.1
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 1.4e-36 157.1 166 60.8
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.9e-36 156.8 149 60.4
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 9.3e-36 154.5 179 54.7
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.6e-35 153.7 150 63.3
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 2.1e-35 153.3 192 56.2
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 4.6e-35 152.1 152 58.6
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 1.0e-34 151.0 178 55.6
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 1.3e-34 150.6 212 44.8
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 3.0e-34 149.4 208 47.6
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 3.9e-34 149.1 210 45.2
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 5.1e-34 148.7 218 47.2
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 5.1e-34 148.7 219 49.8
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 6.7e-34 148.3 200 54.5
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 1.1e-33 147.5 189 55.6
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 1.1e-33 147.5 189 55.6
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.5e-33 147.1 197 53.3
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.5e-33 147.1 197 53.3
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.9e-33 146.7 173 50.3
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 5.7e-33 145.2 176 57.4
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 9.6e-33 144.4 165 56.4
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 2.8e-32 142.9 146 56.8
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 2.8e-32 142.9 196 51.5
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 2.2e-29 133.3 143 57.3
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 3.2e-28 129.4 123 65.0
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 9.3e-28 127.9 154 48.1
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 7.9e-27 124.8 130 61.5
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.3e-26 124.0 221 43.4
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.3e-26 123.2 196 44.4
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 4.3e-25 119.0 159 52.8
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 1.8e-23 113.6 140 55.0
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 2.0e-22 110.2 133 55.6
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 5.0e-21 105.5 142 52.8
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 6.5e-21 105.1 213 36.6
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 4.2e-20 102.4 171 40.9
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 8.8e-18 94.7 108 51.9
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 2.5e-17 93.2 175 37.7
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 2.0e-14 83.6 200 33.0
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 2.9e-13 79.7 209 34.4
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 3.2e-12 76.3 152 38.2
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 2.0e-09 67.0 185 32.4
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 4.4e-09 65.9 195 32.3
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 2.4e-07 60.1 163 37.4
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 2.4e-07 60.1 163 37.4
GSVIVG01003341001 Vitis vinifera HOM05D007192 ORTHO05D009034 3.5e-06 56.2 65 46.2
A02p06060 Brassica napus HOM05D007192 ORTHO05D009034 7.7e-06 55.1 32 81.2


User provided reference genes

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