Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G017970 Citrullus lanatus HOM05D008539 ORTHO05D010637 1.8e-290 1001.9 506 100.0
CsaV3_6G044500 Cucumis sativus L. HOM05D008539 ORTHO05D010637 1.9e-223 779.2 507 81.9
MELO3C007672.2 Cucumis melo HOM05D008539 ORTHO05D010637 2.2e-208 729.2 507 76.9
Sed0007885 Sechium edule HOM05D008539 ORTHO05D010637 5.4e-146 521.9 477 65.0
Haze_03958 Corylus avellana HOM05D008539 ORTHO05D010637 2.2e-59 234.2 575 36.3
Prupe.6G212800 Prunus persica HOM05D008539 ORTHO05D010637 1.9e-58 231.1 573 34.9
Cfa006803 Carpinus fangiana HOM05D000349 ORTHO05D000620 1.4e-56 224.9 574 36.9
Manes.13G106500 Manihot esculenta HOM05D008539 ORTHO05D010637 3.6e-49 200.3 564 33.2
FvH4_1g18650 Fragaria vesca HOM05D008539 ORTHO05D010637 6.1e-49 199.5 548 33.9
Dinv26981 Davidia involucrata HOM05D000349 ORTHO05D010637 7.9e-49 199.1 435 38.9
Ciclev10025260m.g Citrus clementina HOM05D008539 ORTHO05D010637 3.0e-48 197.2 504 36.3
RcHm_v2.0_Chr2g0109471 Rosa chinensis HOM05D008539 ORTHO05D010637 2.0e-47 194.5 545 33.0
Thecc.01G080200 Theobroma cacao HOM05D008539 ORTHO05D010637 1.3e-46 191.8 421 38.7
FAN26G2853 Fragaria x ananassa HOM05D008539 ORTHO05D010637 1.2e-44 185.3 542 33.8
FAN23G1883 Fragaria x ananassa HOM05D008539 ORTHO05D010637 2.6e-44 184.1 552 33.3
FAN28G0277 Fragaria x ananassa HOM05D008539 ORTHO05D010637 1.1e-42 178.7 542 32.5
Atru.chr3.1092 Acer truncatum HOM05D008539 ORTHO05D010637 1.5e-42 178.3 573 31.8
Gorai.007G228600 Gossypium raimondii HOM05D008539 ORTHO05D010637 2.3e-40 171.0 469 32.0
Gohir.D11G212700 Gossypium hirsutum HOM05D008539 ORTHO05D010637 3.0e-40 170.6 478 32.8
CANSAT01G2572 Cannabis sativa HOM05D008539 ORTHO05D010637 1.2e-39 168.7 593 31.4
Gohir.A11G210466 Gossypium hirsutum HOM05D008539 ORTHO05D010637 2.6e-39 167.5 539 31.5
CiPaw.08G148100 Carya illinoinensis HOM05D008539 ORTHO05D010637 1.3e-38 165.2 565 32.7
QL06p038103 Quercus lobata HOM05D008539 ORTHO05D010637 5.9e-36 156.4 524 33.8
Nn5g30717 Nelumbo nucifera HOM05D008539 ORTHO05D010637 5.0e-35 153.3 577 28.6
COL.COLO4_11651 Corchorus olitorius HOM05D008539 ORTHO05D010637 9.4e-34 149.1 486 31.9
Ciclev10007100m.g Citrus clementina HOM05D008539 ORTHO05D010637 2.1e-33 147.9 311 40.8
Hma1.2p1_1147F.1_g261540 Hydrangea macrophylla HOM05D008539 ORTHO05D010637 6.8e-32 142.9 416 33.7
MBI16_g05035_MAGBIO Magnolia biondii HOM05D008539 ORTHO05D010637 5.7e-31 139.8 530 31.7
Potri.007G009000 Populus trichocarpa HOM05D008539 ORTHO05D010637 4.8e-30 136.7 381 32.8
arahy.Tifrunner.gnm1.ann1.P8GH0J Arachis hypogaea HOM05D008539 ORTHO05D010637 3.1e-29 134.0 433 31.9
arahy.Tifrunner.gnm1.ann1.W1L6ST Arachis hypogaea HOM05D008539 ORTHO05D010637 3.1e-29 134.0 433 31.9
ATR0767G189 Amborella trichopoda HOM05D008539 ORTHO05D010637 9.1e-29 132.5 436 33.3
FAN19G1588 Fragaria x ananassa HOM05D008539 ORTHO05D010637 3.6e-25 120.6 578 28.9
PSO541G5024 Papaver somniferum HOM05D008539 ORTHO05D010637 1.4e-24 118.6 398 30.9
Sc07g0000280 Simmondsia chinensis HOM05D008539 ORTHO05D010637 5.2e-24 116.7 399 29.8
Glyma.01G197400 Glycine max HOM05D008539 ORTHO05D010637 3.4e-23 114.0 496 27.2
Glyma.11G044300 Glycine max HOM05D008539 ORTHO05D010637 2.2e-22 111.3 360 30.3
Lalb_Chr09g0323801 Lupinus albus HOM05D008539 ORTHO05D010637 2.8e-22 110.9 443 31.6
SEGI_19235 Sequoiadendron giganteum HOM05D008539 ORTHO05D010637 6.3e-22 109.8 315 32.1
Cpa.g.sc129.44 Carica papaya HOM05D008539 ORTHO05D010637 1.2e-20 105.5 308 33.1
PSO675G5298 Papaver somniferum HOM05D008539 ORTHO05D010637 2.7e-20 104.4 563 25.2
Cc07_g07630 Coffea canephora HOM05D008539 ORTHO05D010637 8.6e-19 99.4 316 32.0
Phvul.002G008000 Phaseolus vulgaris HOM05D008539 ORTHO05D010637 2.3e-16 91.3 382 28.5
TAR628G0786 Trochodendron aralioides HOM05D008539 ORTHO05D010637 4.0e-16 90.5 281 32.0
TAR628G1178 Trochodendron aralioides HOM05D008539 ORTHO05D010637 4.4e-15 87.0 312 29.8
Sabra07G0006900 Salix brachista HOM05D002093 ORTHO05D008902 7.5e-15 86.3 271 29.2
VMungo1215G1773 Vigna mungo HOM05D008539 ORTHO05D010637 1.2e-12 79.0 544 25.4
Mapoly0011s0007 Marchantia polymorpha HOM05D008539 ORTHO05D010637 1.0e-11 75.9 302 30.5
Medtr5g014750 Medicago truncatula HOM05D008539 ORTHO05D010637 7.3e-10 69.7 171 35.1
Medtr5g014770 Medicago truncatula HOM05D008539 ORTHO05D010637 8.3e-06 56.2 81 43.2
TPR.G28861 Trifolium pratense HOM05D008539 ORTHO05D010637 8.3e-06 56.2 397 26.2


User provided reference genes

Program Settings