Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G016440 Citrullus lanatus HOM05D004524 ORTHO05D005477 1.4e-122 443.0 220 100.0
Sed0025355 Sechium edule HOM05D004524 ORTHO05D005477 4.6e-86 321.6 189 83.1
CsaV3_6G042750 Cucumis sativus L. HOM05D004524 ORTHO05D005477 4.5e-81 305.1 189 80.4
MELO3C007516.2 Cucumis melo HOM05D004524 ORTHO05D005477 1.9e-79 299.7 189 79.4
Cfa004228 Carpinus fangiana HOM05D004524 ORTHO05D005477 2.8e-67 259.2 187 65.8
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 8.2e-67 257.7 188 65.4
CiPaw.01G027900 Carya illinoinensis HOM05D004524 ORTHO05D005477 1.1e-66 257.3 188 66.5
Haze_15172 Corylus avellana HOM05D004524 ORTHO05D005477 1.2e-65 253.8 187 64.7
Glyma.16G144200 Glycine max HOM05D004524 ORTHO05D005477 1.2e-65 253.8 210 61.9
PGR102G0585 Punica granatum HOM05D004524 ORTHO05D005477 3.4e-65 252.3 212 59.0
GSVIVG01005092001 Vitis vinifera HOM05D004524 ORTHO05D005477 5.0e-64 248.4 220 58.2
Atru.chr3.464 Acer truncatum HOM05D004524 ORTHO05D005477 1.4e-63 246.9 187 66.3
Cc07_g05430 Coffea canephora HOM05D004524 ORTHO05D005477 1.4e-63 246.9 211 60.2
Peaxi162Scf00535g00735 Petunia axillaris HOM05D004524 ORTHO05D005477 1.4e-63 246.9 209 60.8
VMungo0251G2856 Vigna mungo HOM05D004524 ORTHO05D005477 1.9e-63 246.5 210 61.4
Actinidia30986 Actinidia chinensis HOM05D004524 ORTHO05D005477 2.5e-63 246.1 204 61.8
Prupe.7G144700 Prunus persica HOM05D004524 ORTHO05D005477 2.5e-63 246.1 210 60.0
Ciclev10024678m.g Citrus clementina HOM05D004524 ORTHO05D005477 3.2e-63 245.7 210 60.5
Lalb_Chr05g0226951 Lupinus albus HOM05D004524 ORTHO05D005477 3.2e-63 245.7 210 60.0
RcHm_v2.0_Chr2g0103341 Rosa chinensis HOM05D004524 ORTHO05D005477 3.2e-63 245.7 212 61.8
Duzib187G1201 Durio zibethinus HOM05D004524 ORTHO05D005477 5.5e-63 245.0 187 63.6
Sabra07G0030300 Salix brachista HOM05D004524 ORTHO05D005477 9.4e-63 244.2 207 60.4
Ca_22222_v3 Cicer arietinum L. HOM05D004524 ORTHO05D005477 1.2e-62 243.8 210 60.0
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 1.2e-62 243.8 195 63.1
AUR62027230 Chenopodium quinoa HOM05D004524 ORTHO05D005477 1.6e-62 243.4 211 59.2
Migut.H00497 Erythranthe guttata HOM05D004524 ORTHO05D005477 2.1e-62 243.0 210 58.1
Nn5g29420 Nelumbo nucifera HOM05D004524 ORTHO05D005477 2.1e-62 243.0 210 61.9
TWI53G1766 Tripterygium wilfordii HOM05D004524 ORTHO05D005477 2.1e-62 243.0 210 60.0
Thecc.01G046200 Theobroma cacao HOM05D004524 ORTHO05D005477 2.7e-62 242.7 209 59.8
arahy.Tifrunner.gnm1.ann1.S59764 Arachis hypogaea HOM05D004524 ORTHO05D005477 3.6e-62 242.3 213 59.2
FAN19G0876 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.6e-62 242.3 212 60.4
FAN26G3430 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.6e-62 242.3 212 60.4
SalBow1G7798 Salvia bowleyana HOM05D004524 ORTHO05D005477 3.6e-62 242.3 208 58.7
Ah.02g126100 Amaranthus hybridus HOM05D004524 ORTHO05D005477 4.6e-62 241.9 213 60.1
FAN28G0821 Fragaria x ananassa HOM05D004524 ORTHO05D005477 6.1e-62 241.5 212 59.9
EL10Ac6g14835 Beta vulgaris HOM05D004524 ORTHO05D005477 1.4e-61 240.4 210 58.6
Lj4g0019712 Lotus japonicus HOM05D004524 ORTHO05D005477 1.4e-61 240.4 211 59.7
TAR628G0958 Trochodendron aralioides HOM05D004524 ORTHO05D005477 1.8e-61 240.0 207 61.4
vmacro17888 Vaccinium macrocarpon HOM05D004524 ORTHO05D005477 3.0e-61 239.2 209 58.9
Eucgr.H01945 Eucalyptus grandis HOM05D004524 ORTHO05D005477 3.9e-61 238.8 212 59.9
Gohir.D11G194900 Gossypium hirsutum HOM05D004524 ORTHO05D005477 3.9e-61 238.8 187 64.2
Gorai.007G208400 Gossypium raimondii HOM05D004524 ORTHO05D005477 3.9e-61 238.8 187 64.2
Manes.13G131650 Manihot esculenta HOM05D004524 ORTHO05D005477 3.9e-61 238.8 209 59.3
Rhsim08G0108900 Rhododendron simsii HOM05D004524 ORTHO05D005477 3.9e-61 238.8 191 61.3
Potri.007G034900 Populus trichocarpa HOM05D004524 ORTHO05D005477 1.1e-60 237.3 204 59.8
FAN23G1697 Fragaria x ananassa HOM05D004524 ORTHO05D005477 1.5e-60 236.9 212 59.9
Gohir.A11G188400 Gossypium hirsutum HOM05D004524 ORTHO05D005477 1.5e-60 236.9 187 63.6
Psat0s4220g0040 Pisum sativum HOM05D004524 ORTHO05D005477 2.6e-60 236.1 212 58.0
CAN.G836.23 Capsicum annuum HOM05D004524 ORTHO05D005477 3.3e-60 235.7 207 59.9
MD02G1159300 Malus domestica HOM05D004524 ORTHO05D005477 4.4e-60 235.3 207 58.0
Hund14111 Selenicereus undatus HOM05D004524 ORTHO05D005477 9.7e-60 234.2 209 57.9
CANSAT01G1357 Cannabis sativa HOM05D004524 ORTHO05D005477 1.3e-59 233.8 210 58.1
Aqoxy5G01755 Aquilegia oxysepala HOM05D004524 ORTHO05D005477 1.7e-59 233.4 212 59.9
COL.COLO4_22187 Corchorus olitorius HOM05D004524 ORTHO05D005477 2.8e-59 232.6 216 55.1
Sopen02g034830 Solanum pennellii HOM05D004524 ORTHO05D005477 2.8e-59 232.6 206 58.3
HPP92_018815 Vanilla planifolia HOM05D004524 ORTHO05D005477 4.8e-59 231.9 215 57.2
Medtr8g078970 Medicago truncatula HOM05D004524 ORTHO05D005477 6.3e-59 231.5 213 57.7
Solyc02g090130.4 Solanum lycopersicum HOM05D004524 ORTHO05D005477 6.3e-59 231.5 186 62.4
AT3G50380 Arabidopsis thaliana HOM05D004524 ORTHO05D005477 4.1e-58 228.8 216 56.5
THA.LOC104827123 Tarenaya hassleriana HOM05D004524 ORTHO05D005477 4.1e-58 228.8 215 56.3
AUR62003242 Chenopodium quinoa HOM05D004524 ORTHO05D005477 5.3e-58 228.4 200 58.5
AL5G30510 Arabidopsis lyrata HOM05D004524 ORTHO05D005477 9.1e-58 227.6 216 55.1
Carub.0005s1670 Capsella rubella HOM05D004524 ORTHO05D005477 1.2e-57 227.3 216 55.6
PSO170G3447 Papaver somniferum HOM05D004524 ORTHO05D005477 3.4e-57 225.7 211 55.9
Sc16g0001530 Simmondsia chinensis HOM05D004524 ORTHO05D005477 4.5e-57 225.3 207 58.0
MSTRG.23802 Avicennia marina HOM05D004524 ORTHO05D005477 7.7e-57 224.6 208 56.2
Thhalv10027614m.g Eutrema salsugineum HOM05D004524 ORTHO05D005477 7.7e-57 224.6 219 54.8
ATR0733G201 Amborella trichopoda HOM05D004524 ORTHO05D005477 1.7e-56 223.4 209 56.9
arahy.Tifrunner.gnm1.ann1.7NUW0V Arachis hypogaea HOM05D004524 ORTHO05D005477 1.7e-56 223.4 204 57.4
Zm00001eb030660 Zea mays HOM05D004524 ORTHO05D005477 1.7e-56 223.4 195 60.5
CARHR159880 Cardamine hirsuta HOM05D004524 ORTHO05D005477 3.8e-56 222.2 218 55.0
Aa31LG4G18620 Aethionema arabicum HOM05D004524 ORTHO05D005477 6.5e-56 221.5 219 53.4
PSO700G0043 Papaver somniferum HOM05D004524 ORTHO05D005477 6.5e-56 221.5 212 56.1
A01p24160 Brassica napus HOM05D004524 ORTHO05D005477 1.1e-55 220.7 215 55.3
BraA01t02328Z Brassica rapa HOM05D004524 ORTHO05D005477 1.1e-55 220.7 215 55.3
TPR.G11249 Trifolium pratense HOM05D004524 ORTHO05D005477 3.2e-55 219.2 195 59.0
BcaC09g50025 Brassica carinata HOM05D004524 ORTHO05D005477 5.5e-55 218.4 215 54.9
C01p29870 Brassica napus HOM05D004524 ORTHO05D005477 5.5e-55 218.4 215 54.9
BcaB05g23215 Brassica carinata HOM05D004524 ORTHO05D005477 5.2e-53 211.8 215 53.0
CDE01G0297 Ceratophyllum demersum HOM05D004524 ORTHO05D005477 7.4e-52 208.0 207 55.1
unitig_62.g23407 Utricularia gibba HOM05D004524 ORTHO05D005477 9.7e-52 207.6 186 57.0
HanXRQChr12g0378491 Helianthus annuus HOM05D004524 ORTHO05D005477 1.1e-50 204.1 210 51.9
BolC1t02927H Brassica oleracea HOM05D004524 ORTHO05D005477 4.5e-49 198.7 199 54.3
Lsat_1_v5_gn_3_94181 Lactuca sativa HOM05D004524 ORTHO05D005477 7.7e-49 198.0 175 56.0
FvH4_1g14580 Fragaria vesca HOM05D004524 ORTHO05D005477 3.2e-47 192.6 165 60.0
SGA_v2.0_scaffold15G07211 Striga asiatica HOM05D004524 ORTHO05D005477 9.1e-42 174.5 212 48.1
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 3.8e-40 169.1 157 56.7
ECA246G4564 Erigeron canadensis HOM05D004524 ORTHO05D005477 2.5e-39 166.4 151 54.3
Mapoly0053s0053 Marchantia polymorpha HOM05D004524 ORTHO05D005477 2.7e-38 162.9 216 45.4
MBI16_g31332_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 2.3e-37 159.8 210 45.2
Pp3c8_13080 Physcomitrium patens HOM05D004524 ORTHO05D005477 1.2e-36 157.5 196 43.9
FvH4_5g25081 Fragaria vesca HOM05D004524 ORTHO05D005477 1.4e-34 150.6 150 53.3
SEGI_08749 Sequoiadendron giganteum HOM05D004524 ORTHO05D005477 2.4e-34 149.8 195 41.5
Migut.H00499 Erythranthe guttata HOM05D004524 ORTHO05D005477 7.0e-34 148.3 208 42.3
CBR_g51675 Chara braunii HOM05D004524 ORTHO05D005477 8.8e-29 131.3 216 36.6
FAN18G1633 Fragaria x ananassa HOM05D004524 ORTHO05D005477 5.4e-26 122.1 130 50.8
GSVIVG01005094001 Vitis vinifera HOM05D004524 ORTHO05D005477 1.2e-25 120.9 96 65.6
Nitab4.5_0000108g0200 Nicotiana tabacum HOM05D004524 ORTHO05D005477 3.3e-23 112.8 105 58.1
Cpa.g.sc15.76 Carica papaya HOM05D004524 ORTHO05D005477 1.2e-22 110.9 113 50.4
AagrBONN_evm.TU.Sc2ySwM_344.2829 Anthoceros agrestis HOM05D004524 ORTHO05D005477 2.8e-14 83.2 95 45.3


User provided reference genes

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