Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.8e-184 649.0 318 100.0
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 5.0e-166 587.8 318 89.9
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 2.5e-165 585.5 318 89.6
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 5.6e-109 398.3 310 63.2
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.4e-107 393.7 239 80.3
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 5.8e-106 388.3 312 63.1
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.3e-105 387.1 308 62.0
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 1.2e-103 380.6 312 62.2
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 1.3e-102 377.1 313 59.7
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.9e-102 375.6 311 61.1
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 3.9e-102 375.6 313 59.7
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.1e-101 374.0 311 60.5
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.5e-101 373.6 311 60.5
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 6.2e-100 368.2 311 58.2
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.1e-99 367.5 287 61.0
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 1.1e-99 367.5 314 58.3
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.8e-99 366.7 324 58.6
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 3.1e-99 365.9 308 59.7
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 4.5e-98 362.1 315 57.5
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 3.8e-97 359.0 308 59.1
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 4.2e-96 355.5 345 52.5
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 1.2e-95 354.0 287 59.6
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.1e-93 347.4 306 57.5
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.5e-93 347.1 306 58.5
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.5e-93 347.1 320 53.8
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 1.9e-93 346.7 323 56.3
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 3.3e-93 345.9 306 54.9
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.3e-92 344.0 327 53.5
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 4.8e-92 342.0 316 54.4
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 4.8e-92 342.0 316 56.3
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.4e-91 339.7 309 52.8
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 4.0e-91 339.0 257 62.6
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 4.0e-91 339.0 312 56.1
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.0e-90 336.7 287 55.4
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.3e-89 334.0 287 55.1
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.9e-89 332.8 287 54.7
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 3.9e-86 322.4 296 54.4
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.1e-86 322.0 286 54.5
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 8.7e-86 321.2 308 50.6
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.1e-85 320.9 286 54.5
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.9e-85 320.1 286 54.5
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 2.5e-85 319.7 280 55.7
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 4.3e-85 318.9 280 54.6
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 6.2e-84 315.1 283 53.4
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 8.2e-84 314.7 297 54.9
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 1.5e-82 310.5 324 52.5
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 5.8e-82 308.5 292 54.1
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 1.0e-81 307.8 304 52.0
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.3e-81 307.4 323 50.8
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 2.2e-81 306.6 256 58.6
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 3.8e-81 305.8 280 53.2
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 3.8e-81 305.8 283 53.0
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 4.9e-81 305.4 286 53.1
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.1e-80 304.3 284 53.9
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 3.2e-80 302.8 308 50.6
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 9.3e-80 301.2 303 52.1
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.6e-79 300.4 257 56.0
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 2.7e-79 299.7 287 55.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.0e-78 297.7 321 49.8
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 2.3e-78 296.6 232 62.1
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 2.3e-78 296.6 279 50.5
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 3.9e-78 295.8 308 49.4
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 3.9e-78 295.8 309 49.5
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 6.7e-78 295.0 310 49.7
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.5e-77 293.9 321 49.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 2.5e-77 293.1 291 48.8
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.3e-76 290.8 280 51.1
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.6e-76 290.4 294 50.3
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 2.8e-76 289.7 326 48.8
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 2.8e-76 289.7 291 48.8
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 2.8e-76 289.7 275 54.5
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 3.7e-76 289.3 285 50.9
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 4.8e-76 288.9 320 48.1
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 4.8e-76 288.9 289 50.9
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 8.2e-76 288.1 281 52.3
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.8e-75 287.0 281 52.3
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 2.4e-75 286.6 309 46.9
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 4.1e-75 285.8 289 49.8
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 4.1e-75 285.8 257 55.3
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 9.0e-75 284.6 321 47.7
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 3.4e-74 282.7 319 48.0
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 3.4e-74 282.7 319 48.0
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 3.4e-74 282.7 308 46.8
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 4.5e-74 282.3 320 45.9
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 7.7e-74 281.6 268 52.2
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.3e-73 280.8 248 56.0
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.7e-73 280.4 232 56.5
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 1.7e-73 280.4 291 49.1
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 3.8e-73 279.3 282 50.4
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 5.0e-73 278.9 270 52.6
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.9e-72 276.9 288 49.7
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 4.2e-72 275.8 212 61.3
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 6.1e-63 245.4 283 45.6
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 9.7e-61 238.0 294 41.8
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.3e-57 227.6 291 41.9
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.7e-57 227.3 271 46.5
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 7.7e-42 175.3 314 36.9
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.6e-37 160.2 145 57.2
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 1.3e-36 157.9 153 56.2
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 4.2e-32 142.9 122 52.5
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 2.3e-30 137.1 131 45.0
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.7e-28 131.0 128 54.7
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 9.2e-27 125.2 238 32.8
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 4.3e-24 116.3 259 33.2
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 6.8e-22 109.0 116 48.3
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 6.4e-20 102.4 87 60.9
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 1.9e-19 100.9 87 59.8
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 3.9e-17 93.2 87 56.3
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 3.3e-16 90.1 138 35.5
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 7.8e-10 68.9 83 45.8
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 1.0e-09 68.6 64 50.0
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 1.3e-09 68.2 104 40.4
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 5.1e-09 66.2 215 25.1
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 8.6e-09 65.5 52 61.5
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 1.8e-06 57.8 86 38.4


User provided reference genes

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