Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 5.8e-91 339.3 491 100.0
ClCG00G006240 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.4e-65 255.0 140 95.0
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.4e-65 255.0 140 95.0
ClCG09G021760 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.8e-39 168.3 144 68.8
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 8.0e-16 89.7 84 54.8
Sed0010182 Sechium edule HOM05D008619 ORTHO05D000090 1.0e-15 89.4 139 45.3
CsaV3_7G027240 Cucumis sativus L. HOM05D008619 ORTHO05D000090 9.8e-14 82.8 124 49.2
Sed0002057 Sechium edule HOM05D008619 ORTHO05D000090 6.3e-13 80.1 139 44.6
Sed0014539 Sechium edule HOM05D008619 ORTHO05D000090 6.3e-13 80.1 145 40.7
Sed0021875 Sechium edule HOM05D008619 ORTHO05D000090 6.3e-13 80.1 147 43.5
CsaV3_7G027720 Cucumis sativus L. HOM05D008619 ORTHO05D000090 8.3e-13 79.7 141 43.3
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 1.8e-12 78.6 134 46.3
MD05G1203800 Malus domestica HOM05D008619 ORTHO05D000090 2.4e-12 78.2 136 42.6
RcHm_v2.0_Chr6g0289221 Rosa chinensis HOM05D000162 ORTHO05D000090 1.2e-11 75.9 128 43.0
QL04p081370 Quercus lobata HOM05D000162 ORTHO05D000090 4.5e-11 73.9 133 39.1
CsaV3_7G027260 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.3e-10 72.4 147 38.1
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 2.3e-10 71.6 145 36.6
Sed0018285 Sechium edule HOM05D008619 ORTHO05D000090 2.3e-10 71.6 116 49.1
CsaV3_7G027280 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.9e-10 71.2 74 50.0
FvH4_2g22260 Fragaria vesca HOM05D000162 ORTHO05D000090 2.9e-10 71.2 134 41.0
QL12p042932 Quercus lobata HOM05D000162 ORTHO05D000090 2.9e-10 71.2 133 39.1
RcHm_v2.0_Chr6g0289191 Rosa chinensis HOM05D000162 ORTHO05D000090 2.9e-10 71.2 134 41.0
MELO3C012708.2 Cucumis melo HOM05D008619 ORTHO05D000090 5.0e-10 70.5 146 41.8
CsaV3_7G027920 Cucumis sativus L. HOM05D008619 ORTHO05D000090 5.0e-10 70.5 138 43.5
Sed0025187 Sechium edule HOM05D008619 ORTHO05D000090 8.6e-10 69.7 70 50.0
CsaV3_7G022190 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.5e-09 68.9 145 38.6
FAN24G2639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-09 68.2 134 40.3
FAN27G0396 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.5e-09 68.2 134 39.6
MELO3C028898.2 Cucumis melo HOM05D008619 ORTHO05D000090 3.3e-09 67.8 69 49.3
Sed0014525 Sechium edule HOM05D008619 ORTHO05D000090 5.6e-09 67.0 101 39.6
MELO3C015722.2 Cucumis melo HOM05D008619 ORTHO05D025208 9.5e-09 66.2 62 56.5
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 1.6e-08 65.5 135 40.7
Prupe.8G230100 Prunus persica HOM05D008619 ORTHO05D000090 2.1e-08 65.1 142 35.9
CSS0034526 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 4.0e-07 60.8 105 38.1
CSS0040127 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 4.0e-07 60.8 105 38.1
Sed0020881 Sechium edule HOM05D008619 ORTHO05D000090 4.0e-07 60.8 121 39.7
GSVIVG01000757001 Vitis vinifera HOM05D000162 ORTHO05D000090 5.2e-07 60.5 140 35.0
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 8.9e-07 59.7 89 42.7
Actinidia33760 Actinidia chinensis HOM05D000162 ORTHO05D000090 2.0e-06 58.5 94 39.4
Sed0014881 Sechium edule HOM05D008619 ORTHO05D010307 2.6e-06 58.2 61 80.3
Atru.chr5.1765 Acer truncatum HOM05D008619 ORTHO05D000090 5.7e-06 57.0 138 34.8
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.5e-06 56.6 65 43.1
Atru.chr6.231 Acer truncatum HOM05D000162 ORTHO05D000090 9.8e-06 56.2 73 39.7


User provided reference genes

Program Settings