Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 4.4e-123 446.0 596 100.0
ClCG00G006240 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.1e-70 271.9 140 100.0
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 2.5e-65 254.2 140 95.0
ClCG09G021760 Citrullus lanatus HOM05D008619 ORTHO05D000090 6.9e-44 183.0 144 72.9
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 3.8e-18 97.4 78 61.5
Sed0010182 Sechium edule HOM05D008619 ORTHO05D000090 5.0e-18 97.1 138 49.3
CsaV3_7G027240 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.5e-17 94.7 124 52.4
Sed0002057 Sechium edule HOM05D008619 ORTHO05D000090 9.4e-17 92.8 140 49.3
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 6.1e-16 90.1 134 49.3
Sed0014539 Sechium edule HOM05D008619 ORTHO05D000090 8.0e-16 89.7 140 43.6
Sed0021875 Sechium edule HOM05D008619 ORTHO05D000090 8.0e-16 89.7 144 46.5
CsaV3_7G027720 Cucumis sativus L. HOM05D008619 ORTHO05D000090 3.0e-15 87.8 135 46.7
Sed0018285 Sechium edule HOM05D008619 ORTHO05D000090 2.6e-14 84.7 116 51.7
CsaV3_7G027280 Cucumis sativus L. HOM05D008619 ORTHO05D000090 3.4e-14 84.3 73 57.5
CsaV3_7G027920 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.3e-13 82.4 136 47.1
CsaV3_7G027260 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.7e-13 82.0 140 41.4
Sed0014525 Sechium edule HOM05D008619 ORTHO05D000090 4.9e-13 80.5 101 44.6
MD05G1203800 Malus domestica HOM05D008619 ORTHO05D000090 1.1e-12 79.3 130 43.1
MELO3C015722.2 Cucumis melo HOM05D008619 ORTHO05D025208 1.8e-12 78.6 62 62.9
Sed0025187 Sechium edule HOM05D008619 ORTHO05D000090 9.1e-12 76.3 66 54.5
FvH4_2g22260 Fragaria vesca HOM05D000162 ORTHO05D000090 1.2e-11 75.9 128 41.4
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 2.7e-11 74.7 139 37.4
MELO3C012708.2 Cucumis melo HOM05D008619 ORTHO05D000090 3.5e-11 74.3 140 43.6
RcHm_v2.0_Chr6g0289191 Rosa chinensis HOM05D000162 ORTHO05D000090 3.5e-11 74.3 128 42.2
MELO3C028898.2 Cucumis melo HOM05D008619 ORTHO05D000090 4.5e-11 73.9 64 56.2
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 4.5e-11 73.9 135 43.0
FAN24G2639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.0e-10 72.8 128 40.6
FAN27G0396 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.0e-10 72.8 128 39.8
CsaV3_7G022190 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.7e-10 72.0 140 42.1
QL04p081370 Quercus lobata HOM05D000162 ORTHO05D000090 2.3e-10 71.6 130 39.2
RcHm_v2.0_Chr6g0289221 Rosa chinensis HOM05D000162 ORTHO05D000090 2.9e-10 71.2 141 39.0
Sed0020881 Sechium edule HOM05D008619 ORTHO05D000090 3.8e-10 70.9 127 42.5
QL12p042932 Quercus lobata HOM05D000162 ORTHO05D000090 6.6e-10 70.1 129 39.5
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 8.6e-10 69.7 89 46.1
Prupe.8G230100 Prunus persica HOM05D008619 ORTHO05D000090 9.5e-09 66.2 136 36.0
Eucgr.K03304 Eucalyptus grandis HOM05D000162 ORTHO05D000090 4.7e-08 63.9 142 38.0
Atru.chr5.1765 Acer truncatum HOM05D008619 ORTHO05D000090 8.0e-08 63.2 135 36.3
Eucgr.K03305 Eucalyptus grandis HOM05D000162 ORTHO05D000090 8.0e-08 63.2 146 37.7
Sed0014881 Sechium edule HOM05D008619 ORTHO05D010307 3.0e-07 61.2 63 79.4
CSS0034526 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 5.2e-07 60.5 96 38.5
CSS0040127 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 5.2e-07 60.5 96 38.5
Sed0000927 Sechium edule HOM05D008619 ORTHO05D000090 6.8e-07 60.1 66 47.0
Actinidia33760 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.2e-06 59.3 133 34.6
Eucgr.K03302 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.5e-06 58.9 141 36.9
CANSAT80G2501 Cannabis sativa HOM05D000162 ORTHO05D000090 4.4e-06 57.4 127 38.6
GSVIVG01000757001 Vitis vinifera HOM05D000162 ORTHO05D000090 4.4e-06 57.4 134 35.1
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.7e-06 57.0 86 38.4
Thecc.01G265100 Theobroma cacao HOM05D008619 ORTHO05D000090 5.7e-06 57.0 137 37.2
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 5.7e-06 57.0 138 33.3
Atru.chr6.231 Acer truncatum HOM05D000162 ORTHO05D000090 7.5e-06 56.6 67 40.3
CANSAT11G1734 Cannabis sativa HOM05D000162 ORTHO05D000090 7.5e-06 56.6 128 38.3
Ciclev10028053m.g Citrus clementina HOM05D000162 ORTHO05D000090 7.5e-06 56.6 60 43.3


User provided reference genes

Program Settings