Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 1.2e-141 506.5 256 100.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.2e-131 471.9 256 92.2
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 3.3e-112 408.7 259 82.6
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 6.3e-95 351.3 194 90.2
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 6.6e-92 341.3 255 69.8
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 6.6e-92 341.3 208 82.7
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.9e-91 339.7 269 67.7
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 2.5e-91 339.3 262 70.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 4.2e-91 338.6 277 68.6
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 2.1e-90 336.3 209 81.3
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 2.8e-90 335.9 230 76.1
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 3.6e-90 335.5 202 82.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 4.7e-90 335.1 243 71.2
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 4.7e-90 335.1 267 69.3
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 6.1e-90 334.7 284 65.5
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 6.1e-90 334.7 225 77.3
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 8.0e-90 334.3 202 84.2
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 8.0e-90 334.3 267 68.9
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.4e-89 333.6 202 82.2
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.8e-89 333.2 202 83.7
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.8e-89 333.2 268 67.2
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 6.8e-89 331.3 277 66.1
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 8.9e-89 330.9 209 79.9
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 8.9e-89 330.9 225 76.9
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.5e-88 330.1 241 70.5
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.6e-88 329.3 217 77.9
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 3.4e-88 328.9 202 80.7
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.4e-88 328.9 241 70.5
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 3.4e-88 328.9 241 70.5
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 3.4e-88 328.9 199 82.4
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 3.4e-88 328.9 203 82.8
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 5.7e-88 328.2 223 74.4
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 1.7e-87 326.6 218 76.6
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 1.7e-87 326.6 272 66.9
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.7e-87 326.6 240 71.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.7e-87 326.6 260 68.5
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.7e-87 326.6 201 81.6
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.2e-87 326.2 202 80.2
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 2.8e-87 325.9 223 76.2
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 2.8e-87 325.9 236 71.6
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 3.7e-87 325.5 200 80.5
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 3.7e-87 325.5 217 77.9
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.7e-87 325.5 187 86.1
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.3e-87 324.7 273 66.3
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.1e-86 323.9 273 66.7
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.4e-86 323.6 198 81.8
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 2.4e-86 322.8 195 81.5
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.4e-86 322.8 202 81.7
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 2.4e-86 322.8 203 82.3
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.4e-86 322.8 212 78.3
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 3.1e-86 322.4 234 74.4
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 3.1e-86 322.4 197 83.8
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.1e-86 322.4 273 66.3
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 5.4e-86 321.6 199 83.9
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 5.4e-86 321.6 201 80.1
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 7.0e-86 321.2 269 68.0
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 9.2e-86 320.9 201 80.1
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.2e-85 320.5 202 79.2
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.2e-85 320.5 199 82.9
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.2e-85 320.5 268 67.9
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.2e-85 320.5 227 73.1
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 2.0e-85 319.7 188 86.7
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 2.7e-85 319.3 263 68.4
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 3.5e-85 318.9 208 79.3
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 7.8e-85 317.8 201 80.6
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 7.8e-85 317.8 261 64.8
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 7.8e-85 317.8 255 66.7
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 7.8e-85 317.8 235 70.6
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.0e-84 317.4 203 80.3
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.0e-84 317.4 203 80.3
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.3e-84 317.0 235 71.5
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 2.3e-84 316.2 247 68.8
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.3e-84 316.2 201 81.1
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.3e-84 316.2 263 66.2
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.3e-84 316.2 230 72.2
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 2.9e-84 315.8 197 80.2
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 2.9e-84 315.8 233 72.5
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 2.9e-84 315.8 192 83.9
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 8.6e-84 314.3 186 84.9
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.1e-83 313.9 233 72.5
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.1e-83 313.9 197 80.7
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.5e-83 313.5 186 83.9
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.5e-83 312.8 219 76.7
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 2.5e-83 312.8 186 82.3
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 3.3e-83 312.4 263 65.4
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 5.6e-83 311.6 196 80.1
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 7.3e-83 311.2 263 65.8
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.2e-82 310.5 263 65.8
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.6e-82 310.1 263 65.4
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 2.8e-82 309.3 188 84.6
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 3.6e-82 308.9 209 76.6
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 4.7e-82 308.5 191 84.3
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 6.1e-82 308.1 202 76.7
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 8.0e-82 307.8 209 76.1
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 1.5e-80 303.5 189 81.0
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 3.4e-80 302.4 185 79.5
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 5.8e-80 301.6 194 79.4
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.3e-79 300.4 190 77.4
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.4e-78 297.0 248 63.3
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 1.3e-76 290.4 258 64.0
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 8.9e-73 277.7 204 70.6
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 5.4e-70 268.5 195 67.2
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.7e-68 263.5 200 70.0
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 2.3e-68 263.1 164 82.3
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 8.1e-66 254.6 188 66.0
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 4.9e-63 245.4 192 61.5
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 3.0e-60 236.1 208 58.2
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 2.4e-57 226.5 211 63.0
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.2e-56 224.2 241 53.1
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 5.8e-56 221.9 199 60.8
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 1.3e-47 194.1 213 54.0
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 2.2e-47 193.4 109 85.3
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 8.4e-47 191.4 203 49.3
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 2.4e-46 189.9 198 50.0
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 2.1e-45 186.8 134 72.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.4e-38 164.1 109 68.8
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 9.6e-35 151.4 188 42.6
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.4e-31 138.7 118 66.1
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 9.0e-25 118.2 81 72.8
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 9.7e-19 98.2 71 70.4
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.9e-15 86.7 93 57.0
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 3.2e-14 83.2 48 79.2
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 3.7e-10 69.7 44 75.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 9.1e-09 65.1 65 56.9
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 2.2e-07 60.5 44 59.1


User provided reference genes

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