Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 1.6e-231 805.8 437 100.0
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 2.8e-204 715.3 444 86.9
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 7.3e-200 700.7 463 81.9
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 1.3e-164 583.6 396 81.3
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 2.8e-151 539.3 452 65.3
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.9e-148 529.3 398 68.3
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 8.4e-148 527.7 396 67.4
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 6.0e-146 521.5 393 69.0
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 6.0e-146 521.5 397 67.3
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 6.7e-145 518.1 395 66.8
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 8.7e-145 517.7 395 67.1
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 2.5e-144 516.2 401 67.1
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 5.7e-144 515.0 396 67.7
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 9.6e-144 514.2 394 68.0
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.1e-142 510.8 397 66.5
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 1.8e-142 510.0 377 68.2
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 1.8e-142 510.0 396 67.9
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 4.0e-142 508.8 403 66.0
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 4.0e-142 508.8 397 66.2
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 4.0e-142 508.8 397 66.2
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 4.0e-142 508.8 392 67.6
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 4.5e-141 505.4 396 65.7
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.8e-140 502.3 397 65.2
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 6.5e-140 501.5 401 64.8
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 8.4e-140 501.1 396 64.9
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.4e-139 500.4 425 61.9
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.9e-139 500.0 396 64.6
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.5e-139 499.6 396 64.4
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 5.5e-139 498.4 397 65.2
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 9.3e-139 497.7 445 60.2
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 1.6e-138 496.9 381 66.7
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 1.6e-138 496.9 391 66.2
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 1.1e-136 490.7 381 66.4
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 4.3e-136 488.8 393 64.4
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 7.4e-136 488.0 393 63.1
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 1.3e-135 487.3 389 64.8
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.6e-135 486.9 393 64.9
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 8.2e-135 484.6 397 63.2
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 6.9e-134 481.5 381 64.8
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 5.9e-133 478.4 377 65.3
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 7.7e-133 478.0 394 63.2
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 2.2e-132 476.5 392 63.0
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 3.8e-132 475.7 377 64.7
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 3.2e-131 472.6 394 63.5
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 5.5e-131 471.9 394 62.7
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.6e-130 470.3 394 60.2
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 2.7e-130 469.5 377 63.1
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 6.1e-130 468.4 377 62.9
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 6.7e-129 464.9 375 63.5
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 6.7e-129 464.9 398 61.1
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 2.0e-128 463.4 393 59.8
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 4.3e-128 462.2 375 63.2
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 3.7e-127 459.1 393 59.8
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.7e-127 459.1 396 60.6
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 4.8e-127 458.8 396 61.4
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 4.1e-126 455.7 372 63.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.9e-124 449.5 393 59.8
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.9e-123 446.8 334 68.0
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 2.5e-123 446.4 375 62.1
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 3.6e-122 442.6 394 59.1
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 3.0e-121 439.5 332 67.5
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 8.8e-121 438.0 403 58.1
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.5e-120 437.2 393 58.8
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 3.7e-119 432.6 403 57.3
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 1.3e-116 424.1 347 62.2
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.3e-116 424.1 374 60.7
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 2.9e-116 422.9 393 57.0
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 4.2e-115 419.1 384 60.2
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 8.0e-114 414.8 382 59.2
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 1.0e-113 414.5 426 54.0
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 2.6e-109 399.8 330 60.6
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 6.5e-108 395.2 383 56.1
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 1.1e-107 394.4 386 57.5
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 7.2e-107 391.7 385 54.5
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 5.7e-104 382.1 379 54.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 3.7e-103 379.4 306 61.1
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.0e-100 371.3 289 63.7
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.9e-99 367.1 391 51.9
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 5.2e-89 332.4 264 64.4
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 1.2e-88 331.3 269 65.1
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.2e-79 300.4 260 60.0
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 2.1e-66 257.3 219 61.6
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 4.4e-64 249.6 406 38.4
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 3.3e-59 233.4 410 36.1
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 7.3e-59 232.3 372 39.8
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 1.2e-53 214.9 211 55.5
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 6.6e-52 209.1 165 65.5
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 2.6e-48 197.2 222 49.5
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.0e-31 142.1 120 60.0
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.4e-30 138.3 132 56.8
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.3e-27 126.7 125 53.6
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 7.2e-14 82.8 78 50.0
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.1e-11 75.5 63 61.9
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 2.5e-11 74.3 70 54.3
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 3.7e-10 70.5 257 24.9
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 4.5e-08 63.5 55 60.0
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 7.7e-08 62.8 72 48.6
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.8e-07 60.5 369 23.6
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.4e-06 58.5 277 24.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.9e-06 58.2 387 24.0
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.5e-06 57.8 399 20.8
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.5e-06 57.8 277 25.6
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 2.5e-06 57.8 278 23.0
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 2.5e-06 57.8 278 23.0
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 2.5e-06 57.8 153 29.4
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.2e-06 57.4 276 23.6
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 3.2e-06 57.4 380 22.6
Sabra03G0146300 Salix brachista HOM05D007414 ORTHO05D009482 4.2e-06 57.0 43 58.1
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 5.5e-06 56.6 380 22.6
Cre03.g145067 Chlamydomonas reinhardtii HOM05D007414 ORTHO05D009482 7.2e-06 56.2 79 40.5
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 7.2e-06 56.2 379 23.7
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 9.4e-06 55.8 378 22.5


User provided reference genes

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