Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G007480 Citrullus lanatus HOM05D000385 ORTHO05D000269 4.5e-106 387.9 190 100.0
Sed0012049 Sechium edule HOM05D000385 ORTHO05D000269 4.2e-27 125.6 168 47.0
ClCG01G007470 Citrullus lanatus HOM05D000385 ORTHO05D000269 2.2e-23 113.2 165 42.4
CsaV3_5G024440 Cucumis sativus L. HOM05D000385 ORTHO05D000269 4.1e-22 109.0 171 37.4
CsaV3_5G024430 Cucumis sativus L. HOM05D000385 ORTHO05D000269 2.7e-18 96.3 102 54.9
Sed0004937 Sechium edule HOM05D000385 ORTHO05D000269 5.3e-14 82.0 167 34.1
Sed0009732 Sechium edule HOM05D000385 ORTHO05D000269 1.2e-13 80.9 170 35.3
Potri.003G103200 Populus trichocarpa HOM05D000385 ORTHO05D000269 5.9e-13 78.6 165 30.9
Manes.18G142251 Manihot esculenta HOM05D000385 ORTHO05D000269 1.7e-12 77.0 165 32.7
GSVIVG01037804001 Vitis vinifera HOM05D000385 ORTHO05D000269 1.7e-12 77.0 170 31.8
Atru.chr1.3573 Acer truncatum HOM05D000385 ORTHO05D000269 2.9e-12 76.3 165 26.7
TWI59G0479 Tripterygium wilfordii HOM05D000385 ORTHO05D000269 5.0e-12 75.5 165 30.9
Duzib133G0288 Durio zibethinus HOM05D000385 ORTHO05D000269 8.5e-12 74.7 165 32.1
Nn3g16129 Nelumbo nucifera HOM05D000385 ORTHO05D000269 1.4e-11 73.9 166 30.7
Nn3g19437 Nelumbo nucifera HOM05D000385 ORTHO05D000269 1.4e-11 73.9 166 30.7
Potri.017G049200 Populus trichocarpa HOM05D000385 ORTHO05D000269 2.5e-11 73.2 166 30.7
CSS0012911 Camellia sinensis var. sinensis HOM05D002061 ORTHO05D000269 3.2e-11 72.8 167 32.9
COL.COLO4_14171 Corchorus olitorius HOM05D000385 ORTHO05D000269 3.2e-11 72.8 164 30.5
Glyma.03G116300 Glycine max HOM05D000385 ORTHO05D000269 3.2e-11 72.8 165 32.1
Manes.10G103300 Manihot esculenta HOM05D000385 ORTHO05D000269 3.2e-11 72.8 165 32.7
CSS0013726 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 7.2e-11 71.6 166 31.3
Sabra03G0070400 Salix brachista HOM05D000385 ORTHO05D000269 9.4e-11 71.2 165 29.1
Potri.001G130700 Populus trichocarpa HOM05D000385 ORTHO05D000269 1.2e-10 70.9 165 28.5
Dinv15823 Davidia involucrata HOM05D000385 ORTHO05D000269 2.1e-10 70.1 165 31.5
Manes.07G073700 Manihot esculenta HOM05D000385 ORTHO05D000269 2.1e-10 70.1 166 28.3
Potri.014G055400 Populus trichocarpa HOM05D000385 ORTHO05D000269 2.1e-10 70.1 165 30.3
CSS0018544 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 2.7e-10 69.7 167 31.7
FAN06G4299 Fragaria x ananassa HOM05D000385 ORTHO05D000269 2.7e-10 69.7 173 27.2
Nn3g19435 Nelumbo nucifera HOM05D000385 ORTHO05D000269 2.7e-10 69.7 166 29.5
PGSC0003DMG400008609 Solanum tuberosum HOM05D000385 ORTHO05D000269 2.7e-10 69.7 169 29.0
FvH4_7g09650 Fragaria vesca HOM05D000385 ORTHO05D000269 3.6e-10 69.3 165 27.9
RcHm_v2.0_Chr4g0427081 Rosa chinensis HOM05D000385 ORTHO05D000269 3.6e-10 69.3 167 31.7
Actinidia32238 Actinidia chinensis HOM05D000385 ORTHO05D000269 4.7e-10 68.9 166 26.5
Hma1.2p1_0522F.1_g171950 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 4.7e-10 68.9 164 32.3
Oeu012214.1 Olea europaea HOM05D000385 ORTHO05D000269 6.1e-10 68.6 123 32.5
GSVIVG01037800001 Vitis vinifera HOM05D000385 ORTHO05D000269 6.1e-10 68.6 170 29.4
Cfa013586 Carpinus fangiana HOM05D000385 ORTHO05D000269 7.9e-10 68.2 166 28.9
Potri.017G049100 Populus trichocarpa HOM05D000385 ORTHO05D000269 1.0e-09 67.8 165 28.5
TWI14G0740 Tripterygium wilfordii HOM05D000385 ORTHO05D000269 1.0e-09 67.8 166 30.1
QL05p003102 Quercus lobata HOM05D000385 ORTHO05D000269 1.4e-09 67.4 162 28.4
CAN.G419.17 Capsicum annuum HOM05D000385 ORTHO05D000269 1.8e-09 67.0 166 29.5
FAN06G4707 Fragaria x ananassa HOM05D000385 ORTHO05D000269 1.8e-09 67.0 165 27.3
Sopen01g021720 Solanum pennellii HOM05D000385 ORTHO05D000269 1.8e-09 67.0 169 27.8
TWI14G1114 Tripterygium wilfordii HOM05D000385 ORTHO05D000269 1.8e-09 67.0 177 29.4
Prupe.1G107200 Prunus persica HOM05D000385 ORTHO05D000269 2.3e-09 66.6 171 31.0
Prupe.1G107400 Prunus persica HOM05D000385 ORTHO05D000269 2.3e-09 66.6 167 31.1
CSS0041123 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 3.0e-09 66.2 167 31.1
Lj3g0023119 Lotus japonicus HOM05D000385 ORTHO05D000269 3.0e-09 66.2 167 28.7
QL04p033589 Quercus lobata HOM05D000385 ORTHO05D000269 3.0e-09 66.2 164 28.7
Migut.A00991 Erythranthe guttata HOM05D000385 ORTHO05D000269 3.9e-09 65.9 121 32.2
Cfa013589 Carpinus fangiana HOM05D000385 ORTHO05D000269 5.1e-09 65.5 168 28.0
FAN03G0964 Fragaria x ananassa HOM05D000385 ORTHO05D000269 5.1e-09 65.5 154 27.9
QL04p033624 Quercus lobata HOM05D000385 ORTHO05D000269 5.1e-09 65.5 164 28.0
Cfa013582 Carpinus fangiana HOM05D000385 ORTHO05D000269 6.7e-09 65.1 166 28.3
MD13G1141900 Malus domestica HOM05D000385 ORTHO05D000269 6.7e-09 65.1 167 29.3
Sabra17G0041300 Salix brachista HOM05D000385 ORTHO05D000269 6.7e-09 65.1 165 27.9
Sed0020874 Sechium edule HOM05D000385 ORTHO05D000269 6.7e-09 65.1 118 34.7
TWI59G0369 Tripterygium wilfordii HOM05D000385 ORTHO05D000269 6.7e-09 65.1 165 31.5
RcHm_v2.0_Chr4g0426731 Rosa chinensis HOM05D000385 ORTHO05D000269 8.8e-09 64.7 169 30.2
Sabra08G0075300 Salix brachista HOM05D000385 ORTHO05D000269 8.8e-09 64.7 123 30.1
GSVIVG01037806001 Vitis vinifera HOM05D000385 ORTHO05D000269 8.8e-09 64.7 119 35.3
FvH4_4g21321 Fragaria vesca HOM05D000385 ORTHO05D000269 1.1e-08 64.3 182 30.8
FAN12G0750 Fragaria x ananassa HOM05D000385 ORTHO05D000269 1.1e-08 64.3 182 30.8
Nn3g16128 Nelumbo nucifera HOM05D000385 ORTHO05D000269 1.1e-08 64.3 170 28.2
Nn3g19436 Nelumbo nucifera HOM05D000385 ORTHO05D000269 1.1e-08 64.3 170 28.2
RcHm_v2.0_Chr4g0427041 Rosa chinensis HOM05D000385 ORTHO05D000269 1.5e-08 63.9 167 31.1
THA.LOC104826455 Tarenaya hassleriana HOM05D000385 ORTHO05D000269 1.5e-08 63.9 165 28.5
Actinidia32241 Actinidia chinensis HOM05D000385 ORTHO05D000269 2.6e-08 63.2 166 24.7
CSS0021485 Camellia sinensis var. sinensis HOM05D000385 ORTHO05D000269 2.6e-08 63.2 165 28.5
CANSAT54G2731 Cannabis sativa HOM05D000385 ORTHO05D000269 2.6e-08 63.2 165 27.3
Dinv29524 Davidia involucrata HOM05D000385 ORTHO05D000269 2.6e-08 63.2 123 32.5
Thecc.01G389100 Theobroma cacao HOM05D000385 ORTHO05D000269 2.6e-08 63.2 173 28.3
ClCG07G017000 Citrullus lanatus HOM05D000385 ORTHO05D000269 3.3e-08 62.8 114 31.6
Dinv31225 Davidia involucrata HOM05D000385 ORTHO05D000269 3.3e-08 62.8 168 29.8
Oeu012213.1 Olea europaea HOM05D000385 ORTHO05D000269 3.3e-08 62.8 169 29.0
RcHm_v2.0_Chr4g0427051 Rosa chinensis HOM05D000385 ORTHO05D000269 3.3e-08 62.8 121 32.2
Cpa.g.sc271.7 Carica papaya HOM05D000385 ORTHO05D000269 4.4e-08 62.4 156 29.5
CsaV3_6G000180 Cucumis sativus L. HOM05D000385 ORTHO05D000269 4.4e-08 62.4 168 28.6
Actinidia09159 Actinidia chinensis HOM05D000385 ORTHO05D000269 5.7e-08 62.0 166 25.9
CiPaw.02G017800 Carya illinoinensis HOM05D000385 ORTHO05D000269 5.7e-08 62.0 165 28.5
Dinv09547 Davidia involucrata HOM05D000385 ORTHO05D000269 5.7e-08 62.0 119 32.8
Nitab4.5_0004390g0040 Nicotiana tabacum HOM05D000385 ORTHO05D000269 5.7e-08 62.0 169 27.8
Potri.008G005300 Populus trichocarpa HOM05D000385 ORTHO05D000269 5.7e-08 62.0 117 34.2
Sabra01G0101100 Salix brachista HOM05D000385 ORTHO05D000269 5.7e-08 62.0 166 28.9
Cfa013581 Carpinus fangiana HOM05D000385 ORTHO05D000269 7.4e-08 61.6 166 27.7
Cc08_g04710 Coffea canephora HOM05D000385 ORTHO05D000269 7.4e-08 61.6 164 28.7
Hma1.2p1_0784F.1_g217320 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 7.4e-08 61.6 166 31.3
Lj5A220G23 Lonicera japonica HOM05D000385 ORTHO05D000269 7.4e-08 61.6 117 33.3
RcHm_v2.0_Chr4g0426761 Rosa chinensis HOM05D000385 ORTHO05D000269 7.4e-08 61.6 170 31.2
Sabra17G0035200 Salix brachista HOM05D000385 ORTHO05D000269 7.4e-08 61.6 166 26.5
COL.COLO4_06133 Corchorus olitorius HOM05D000385 ORTHO05D000269 9.7e-08 61.2 154 29.2
FAN01G1306 Fragaria x ananassa HOM05D000385 ORTHO05D000269 9.7e-08 61.2 152 26.3
Thecc.04G006300 Theobroma cacao HOM05D000385 ORTHO05D000269 9.7e-08 61.2 166 28.3
vmacro02478 Vaccinium macrocarpon HOM05D000385 ORTHO05D000269 9.7e-08 61.2 166 23.5
CiPaw.02G017900 Carya illinoinensis HOM05D000385 ORTHO05D000269 1.3e-07 60.8 165 24.8
Dinv15822 Davidia involucrata HOM05D000385 ORTHO05D000269 1.3e-07 60.8 164 28.0
QL04p034500 Quercus lobata HOM05D000385 ORTHO05D000269 1.3e-07 60.8 165 27.9
Sabra14G0040700 Salix brachista HOM05D000385 ORTHO05D000269 1.3e-07 60.8 155 29.7
Sabra17G0041700 Salix brachista HOM05D000385 ORTHO05D000269 1.3e-07 60.8 117 30.8
Aa31LG4G3820 Aethionema arabicum HOM05D000385 ORTHO05D000269 1.7e-07 60.5 164 28.0
EL10Ac9g22247 Beta vulgaris HOM05D000385 ORTHO05D000269 1.7e-07 60.5 165 27.9
MELO3C021236.2 Cucumis melo HOM05D000385 ORTHO05D000269 1.7e-07 60.5 168 27.4
PGR004G2128 Punica granatum HOM05D000385 ORTHO05D000269 1.7e-07 60.5 167 26.3
Migut.A01077 Erythranthe guttata HOM05D000385 ORTHO05D000269 2.2e-07 60.1 122 32.8
QL04p034264 Quercus lobata HOM05D000385 ORTHO05D000269 2.2e-07 60.1 164 26.8
QL12p014723 Quercus lobata HOM05D000385 ORTHO05D000269 2.2e-07 60.1 164 26.8
RcHm_v2.0_Chr4g0426981 Rosa chinensis HOM05D000385 ORTHO05D000269 2.2e-07 60.1 152 28.9
Sed0018158 Sechium edule HOM05D000385 ORTHO05D000269 2.2e-07 60.1 169 29.0
TWI14G1150 Tripterygium wilfordii HOM05D000385 ORTHO05D000269 2.2e-07 60.1 174 27.6
Dinv02761 Davidia involucrata HOM05D000385 ORTHO05D000269 2.8e-07 59.7 120 30.8
Hma1.2p1_1093F.1_g256050 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 2.8e-07 59.7 167 28.1
Oeu020281.1 Olea europaea HOM05D000385 ORTHO05D000269 2.8e-07 59.7 119 31.1
arahy.Tifrunner.gnm1.ann1.F4BP1L Arachis hypogaea HOM05D000385 ORTHO05D000269 3.7e-07 59.3 164 26.2
Dinv33026 Davidia involucrata HOM05D000385 ORTHO05D000269 3.7e-07 59.3 168 25.0
Sopen04g003690 Solanum pennellii HOM05D000385 ORTHO05D000269 3.7e-07 59.3 166 27.1
Dinv15824 Davidia involucrata HOM05D000385 ORTHO05D000269 4.8e-07 58.9 123 30.9
Hma1.2p1_0522F.1_g171900 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 4.8e-07 58.9 165 29.1
Psat3g023080 Pisum sativum HOM05D000385 ORTHO05D000269 4.8e-07 58.9 164 25.0
QL04p033651 Quercus lobata HOM05D000385 ORTHO05D000269 4.8e-07 58.9 164 25.6
QL05p003007 Quercus lobata HOM05D000385 ORTHO05D000269 4.8e-07 58.9 180 28.9
Sed0013969 Sechium edule HOM05D000385 ORTHO05D000269 4.8e-07 58.9 131 31.3
Cfa013585 Carpinus fangiana HOM05D000385 ORTHO05D000269 6.3e-07 58.5 166 27.1
Cfa013588 Carpinus fangiana HOM05D000385 ORTHO05D000269 6.3e-07 58.5 167 25.7
FAN07G0810 Fragaria x ananassa HOM05D000385 ORTHO05D000269 6.3e-07 58.5 179 30.2
SGA_v2.0_scaffold104G30238 Striga asiatica HOM05D000385 ORTHO05D000269 6.3e-07 58.5 121 30.6
vmacro00058 Vaccinium macrocarpon HOM05D000385 ORTHO05D000269 6.3e-07 58.5 118 34.7
CsaV3_4G004220 Cucumis sativus L. HOM05D000385 ORTHO05D000269 8.2e-07 58.2 114 29.8
Gorai.001G260500 Gossypium raimondii HOM05D000385 ORTHO05D000269 8.2e-07 58.2 166 27.7
THA.LOC104802613 Tarenaya hassleriana HOM05D000385 ORTHO05D000269 8.2e-07 58.2 125 28.8
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 1.1e-06 57.8 168 26.2
COL.COLO4_27707 Corchorus olitorius HOM05D000385 ORTHO05D000269 1.1e-06 57.8 119 27.7
Duzib151G0284 Durio zibethinus HOM05D000385 ORTHO05D000269 1.1e-06 57.8 127 29.9
Duzib151G0862 Durio zibethinus HOM05D000385 ORTHO05D000269 1.1e-06 57.8 127 29.9
QL04p040449 Quercus lobata HOM05D000385 ORTHO05D000269 1.4e-06 57.4 165 26.7
arahy.Tifrunner.gnm1.ann1.Y7FF37 Arachis hypogaea HOM05D000385 ORTHO05D000269 1.8e-06 57.0 164 25.6
FAN12G2764 Fragaria x ananassa HOM05D000385 ORTHO05D000269 1.8e-06 57.0 172 30.2
Nn3g16130 Nelumbo nucifera HOM05D000385 ORTHO05D000269 1.8e-06 57.0 119 30.3
QL05p003118 Quercus lobata HOM05D000385 ORTHO05D000269 1.8e-06 57.0 169 27.2
CANSAT54G1085 Cannabis sativa HOM05D000385 ORTHO05D000269 2.4e-06 56.6 125 28.0
Ciclev10001916m.g Citrus clementina HOM05D000385 ORTHO05D000269 2.4e-06 56.6 169 27.8
COL.COLO4_32326 Corchorus olitorius HOM05D000385 ORTHO05D000269 2.4e-06 56.6 148 29.1
Eucgr.D01489 Eucalyptus grandis HOM05D000385 ORTHO05D000269 2.4e-06 56.6 164 25.6
Gorai.004G072400 Gossypium raimondii HOM05D000385 ORTHO05D000269 2.4e-06 56.6 165 26.7
QL04p034544 Quercus lobata HOM05D000385 ORTHO05D000269 2.4e-06 56.6 165 26.7
Sed0002327 Sechium edule HOM05D000385 ORTHO05D000269 2.4e-06 56.6 122 31.1
DCAR_030428 Daucus carota HOM05D000385 ORTHO05D000269 3.1e-06 56.2 117 31.6
Dinv15829 Davidia involucrata HOM05D000385 ORTHO05D000269 3.1e-06 56.2 157 26.1
Gohir.D07G225740 Gossypium hirsutum HOM05D000385 ORTHO05D000269 3.1e-06 56.2 166 27.7
MD13G1145600 Malus domestica HOM05D000385 ORTHO05D000269 3.1e-06 56.2 118 30.5
QL04p034533 Quercus lobata HOM05D000385 ORTHO05D000269 3.1e-06 56.2 165 27.3
Thecc.02G314500 Theobroma cacao HOM05D000385 ORTHO05D000269 3.1e-06 56.2 168 28.0
MELO3C017644.2 Cucumis melo HOM05D000385 ORTHO05D000269 4.1e-06 55.8 114 28.1
Duzib264G0554 Durio zibethinus HOM05D000385 ORTHO05D000269 4.1e-06 55.8 166 27.1
Duzib264G0570 Durio zibethinus HOM05D000385 ORTHO05D000269 4.1e-06 55.8 167 28.1
Duzib264G0855 Durio zibethinus HOM05D000385 ORTHO05D000269 4.1e-06 55.8 166 27.1
Gohir.A08G059800 Gossypium hirsutum HOM05D000385 ORTHO05D000269 4.1e-06 55.8 165 27.3
Aqoxy2G02519 Aquilegia oxysepala HOM05D000385 ORTHO05D000269 5.3e-06 55.5 163 26.4
Gohir.D10G182800 Gossypium hirsutum HOM05D000385 ORTHO05D000269 5.3e-06 55.5 126 31.0
Gorai.011G204800 Gossypium raimondii HOM05D000385 ORTHO05D000269 5.3e-06 55.5 126 31.0
Hma1.2p1_1051F.1_g252020 Hydrangea macrophylla HOM05D000385 ORTHO05D000269 5.3e-06 55.5 168 28.6
Sed0021462 Sechium edule HOM05D000385 ORTHO05D000269 5.3e-06 55.5 131 30.5
Atru.chr1.2857 Acer truncatum HOM05D000385 ORTHO05D000269 7.0e-06 55.1 124 27.4
ECA233G3744 Erigeron canadensis HOM05D000385 ORTHO05D000269 7.0e-06 55.1 123 32.5
Gohir.D08G069000 Gossypium hirsutum HOM05D000385 ORTHO05D000269 7.0e-06 55.1 165 26.1
Sed0017988 Sechium edule HOM05D000385 ORTHO05D000269 7.0e-06 55.1 122 30.3
A05p26760 Brassica napus HOM05D000385 ORTHO05D000269 9.1e-06 54.7 117 30.8
BraA05t21558Z Brassica rapa HOM05D000385 ORTHO05D000269 9.1e-06 54.7 117 30.8
Ciclev10001898m.g Citrus clementina HOM05D000385 ORTHO05D000269 9.1e-06 54.7 172 25.6
MD16G1138600 Malus domestica HOM05D000385 ORTHO05D000269 9.1e-06 54.7 118 29.7


User provided reference genes

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