Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 0.0e+00 1594.7 838 100.0
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 0.0e+00 1386.3 805 91.6
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 0.0e+00 1362.1 825 88.1
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 0.0e+00 1352.4 841 85.9
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 0.0e+00 1077.4 868 67.4
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.8e-308 1062.4 862 67.3
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 4.2e-305 1051.2 865 66.0
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.1e-302 1043.1 863 66.0
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 4.2e-297 1024.6 852 65.0
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 4.7e-296 1021.1 811 66.8
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 3.3e-294 1015.0 864 63.4
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.7e-293 1012.7 866 64.4
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 6.3e-293 1010.7 779 67.9
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.5e-291 1006.1 865 63.0
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 5.9e-291 1004.2 855 63.2
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.6e-288 996.1 798 65.9
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 4.7e-288 994.6 815 65.5
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 4.7e-288 994.6 808 66.6
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 1.0e-287 993.4 768 67.7
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 8.2e-285 983.8 867 63.0
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 1.1e-284 983.4 804 65.2
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 5.3e-284 981.1 872 62.6
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.6e-283 979.5 810 64.2
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.6e-283 978.8 746 68.9
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 3.2e-281 971.8 855 62.2
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 5.5e-281 971.1 871 61.9
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.8e-279 966.1 858 61.9
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.5e-275 951.8 770 66.4
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.5e-273 946.4 789 64.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 8.0e-272 940.6 789 63.6
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.1e-268 930.2 792 63.4
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 1.8e-268 929.5 775 64.6
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 9.1e-268 927.2 804 63.1
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.6e-267 926.4 716 68.0
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.0e-267 926.0 811 63.3
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 7.7e-267 924.1 807 61.8
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.3e-266 923.3 788 63.1
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.7e-266 922.9 789 62.9
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 3.3e-265 918.7 775 63.6
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 7.0e-260 901.0 798 60.0
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 2.0e-259 899.4 811 60.8
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.3e-258 896.0 802 61.0
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.1e-257 893.6 811 60.7
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 5.6e-257 891.3 804 61.3
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 7.3e-257 891.0 789 61.7
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.0e-255 887.1 838 58.5
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 4.0e-255 885.2 799 60.5
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 5.2e-255 884.8 750 63.6
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 8.9e-255 884.0 820 58.8
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 7.5e-254 880.9 851 59.0
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.6e-251 873.2 798 61.5
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 3.9e-250 868.6 752 61.6
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 4.7e-248 861.7 805 58.9
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.1e-247 859.0 777 61.3
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 5.2e-247 858.2 779 59.4
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 2.9e-245 852.4 774 60.2
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 4.9e-245 851.7 844 56.4
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 8.3e-245 850.9 782 58.6
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 1.1e-244 850.5 779 59.1
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.1e-244 850.5 781 60.2
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.2e-244 849.0 777 60.7
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 4.1e-244 848.6 779 58.9
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 9.2e-244 847.4 784 58.5
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.2e-243 847.0 751 59.8
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 2.1e-243 846.3 758 61.2
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 2.1e-243 846.3 781 60.1
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 1.7e-242 843.2 776 59.5
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 8.6e-242 840.9 804 59.0
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.9e-241 839.7 758 60.7
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 3.3e-241 839.0 749 62.1
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 5.6e-241 838.2 779 58.8
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 6.2e-240 834.7 845 54.7
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 3.7e-237 825.5 802 56.9
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 6.6e-234 814.7 812 57.1
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.8e-232 809.3 812 56.5
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.4e-230 802.4 764 58.9
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 3.4e-230 802.4 698 63.6
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 2.4e-228 796.2 840 53.5
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.0e-226 790.8 890 53.8
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.7e-226 790.0 850 54.6
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 3.0e-226 789.3 776 55.3
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.8e-221 772.3 699 59.8
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.3e-208 730.7 775 51.0
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 7.6e-206 721.5 738 54.5
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.8e-205 719.2 784 51.1
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 2.1e-200 703.4 837 49.1
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 7.6e-198 694.9 573 66.1
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.7e-181 640.6 594 59.8
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.2e-179 634.4 467 70.7
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.1e-179 633.6 778 47.3
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 1.5e-177 627.5 572 60.0
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.3e-173 614.4 582 58.2
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.7e-173 614.0 490 65.7
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 3.2e-172 609.8 861 46.6
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.0e-170 604.7 704 51.1
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 9.1e-167 591.7 485 64.9
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.3e-160 571.2 629 52.5
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.5e-156 557.8 565 55.9
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 5.4e-151 539.3 489 58.7
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 3.8e-149 533.1 491 58.5
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 6.0e-134 482.6 879 38.7
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.3e-125 454.9 786 36.8
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 8.7e-109 399.1 817 34.8
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 5.3e-90 336.7 282 64.5
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 8.4e-88 329.3 369 48.0
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 3.4e-81 307.4 223 72.2
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 9.3e-79 299.3 240 65.0
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 1.5e-76 292.0 615 32.7
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 1.1e-74 285.8 203 70.0
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 2.5e-71 274.6 849 29.8
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 9.1e-66 256.1 213 59.6
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.4e-61 242.3 241 56.0
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 3.5e-57 227.6 866 25.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.0e-24 119.8 131 53.4
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 1.6e-22 112.5 144 43.8
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 6.0e-17 94.0 165 41.2
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 6.6e-16 90.5 102 51.0
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 4.3e-15 87.8 128 42.2
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 3.1e-13 81.6 68 57.4
Psat5g059800 Pisum sativum HOM05D000380 ORTHO05D320631 8.1e-06 57.0 47 59.6


User provided reference genes

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