Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 3.6e-45 184.5 91 100.0
MELO3C005524.2 Cucumis melo HOM05D007712 ORTHO05D009755 2.6e-19 98.6 53 96.2
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 2.9e-18 95.1 52 84.6
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 2.9e-18 95.1 53 84.9
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 2.9e-18 95.1 53 84.9
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 3.8e-18 94.7 52 86.5
Sed0021045 Sechium edule HOM05D007712 ORTHO05D009755 3.8e-18 94.7 53 88.7
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 5.0e-18 94.4 73 64.4
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 6.5e-18 94.0 52 86.5
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 6.5e-18 94.0 53 84.9
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 6.5e-18 94.0 53 84.9
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 8.5e-18 93.6 53 84.9
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 1.1e-17 93.2 63 73.0
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 1.1e-17 93.2 53 84.9
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 1.1e-17 93.2 53 83.0
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.9e-17 92.4 53 84.9
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 1.9e-17 92.4 53 81.1
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 2.5e-17 92.0 53 79.2
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 3.2e-17 91.7 52 84.6
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 4.2e-17 91.3 55 76.4
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 5.5e-17 90.9 52 80.8
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 5.5e-17 90.9 53 83.0
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 7.2e-17 90.5 52 84.6
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 7.2e-17 90.5 53 84.9
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 9.3e-17 90.1 52 80.8
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 9.3e-17 90.1 53 81.1
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 9.3e-17 90.1 52 80.8
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 1.2e-16 89.7 52 82.7
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 1.6e-16 89.4 52 82.7
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 2.7e-16 88.6 52 80.8
THA.LOC104815500 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 2.7e-16 88.6 52 80.8
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 3.6e-16 88.2 52 80.8
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 3.6e-16 88.2 53 81.1
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 4.6e-16 87.8 53 79.2
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 6.1e-16 87.4 50 82.0
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 1.0e-15 86.7 53 77.4
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 1.0e-15 86.7 52 76.9
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 1.0e-15 86.7 53 77.4
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 1.0e-15 86.7 52 76.9
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 1.4e-15 86.3 52 78.8
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 1.4e-15 86.3 52 82.7
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 1.8e-15 85.9 54 75.9
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 1.8e-15 85.9 53 77.4
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 3.9e-15 84.7 52 73.1
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 3.9e-15 84.7 52 76.9
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 3.9e-15 84.7 58 70.7
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 5.1e-15 84.3 53 73.6
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 5.1e-15 84.3 52 76.9
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 1.5e-14 82.8 52 71.2
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 1.9e-14 82.4 52 75.0
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 2.5e-14 82.0 46 87.0
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 2.5e-14 82.0 50 76.0
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 2.5e-14 82.0 52 71.2
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 3.3e-14 81.6 46 82.6
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 4.3e-14 81.3 50 76.0
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 4.3e-14 81.3 50 76.0
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 4.3e-14 81.3 53 75.5
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 4.3e-14 81.3 45 82.2
Eucgr.E00411 Eucalyptus grandis HOM05D007712 ORTHO05D009755 5.7e-14 80.9 85 55.3
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 7.4e-14 80.5 45 82.2
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 7.4e-14 80.5 57 66.7
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 9.7e-14 80.1 52 76.9
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 9.7e-14 80.1 52 76.9
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 1.3e-13 79.7 61 63.9
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 2.8e-13 78.6 49 75.5
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 2.8e-13 78.6 56 66.1
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 2.8e-13 78.6 53 71.7
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 4.8e-13 77.8 54 75.9
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 6.3e-13 77.4 46 78.3
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 6.3e-13 77.4 54 68.5
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 6.3e-13 77.4 49 75.5
HPP92_021033 Vanilla planifolia HOM05D007712 ORTHO05D009755 6.3e-13 77.4 52 73.1
HPP92_027434 Vanilla planifolia HOM05D007712 ORTHO05D009755 6.3e-13 77.4 52 73.1
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 8.2e-13 77.0 49 73.5
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 1.1e-12 76.6 47 78.7
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 3.1e-12 75.1 56 69.6
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 9.1e-12 73.6 46 73.9
SHI02516 Sapria himalayana HOM05D007712 ORTHO05D009755 9.1e-12 73.6 47 78.7
vmacro00192 Vaccinium macrocarpon HOM05D007712 ORTHO05D009755 9.1e-12 73.6 54 66.7
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 5.9e-11 70.9 44 79.5
Lalb_Chr16g0386781 Lupinus albus HOM05D007712 ORTHO05D009755 1.3e-10 69.7 47 66.0
CBR_g755 Chara braunii HOM05D007712 ORTHO05D009755 2.9e-10 68.6 47 68.1
Lalb_Chr05g0221211 Lupinus albus HOM05D007712 ORTHO05D009755 8.5e-10 67.0 47 61.7
A03p50120 Brassica napus HOM05D007712 ORTHO05D009755 4.2e-09 64.7 52 59.6
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 7.2e-09 63.9 46 63.0
Os03g0102000 Oryza sativa ssp. japonica HOM05D007712 ORTHO05D009755 3.9e-07 58.2 57 54.4
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 6.7e-07 57.4 33 78.8
FAN08G0196 Fragaria x ananassa HOM05D007712 ORTHO05D009755 2.0e-06 55.8 42 71.4
FAN04G1285 Fragaria x ananassa HOM05D007712 ORTHO05D009755 9.7e-06 53.5 42 69.0


User provided reference genes

Program Settings