Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.5e-125 453.0 242 100.0
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 5.2e-115 417.9 242 93.0
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.9e-112 409.5 242 91.7
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.8e-90 334.7 242 74.0
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 5.8e-90 334.7 221 80.1
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.4e-88 330.1 243 72.8
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 9.3e-88 327.4 243 74.5
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.5e-87 325.5 244 71.7
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 6.0e-87 324.7 244 71.7
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 6.0e-87 324.7 241 72.2
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 6.0e-87 324.7 240 72.1
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 1.7e-86 323.2 245 72.7
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 3.0e-86 322.4 240 70.8
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 6.6e-86 321.2 243 71.6
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.1e-85 320.5 242 73.1
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.5e-85 320.1 242 70.7
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.5e-85 320.1 245 71.0
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.9e-85 319.7 246 69.9
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.5e-85 319.3 242 71.5
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.5e-85 319.3 246 71.1
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 2.1e-84 316.2 226 73.0
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 3.6e-84 315.5 242 69.4
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 4.8e-84 315.1 245 69.4
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 6.2e-84 314.7 245 69.4
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 2.4e-83 312.8 242 70.2
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 2.4e-83 312.8 246 70.7
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.1e-83 312.4 243 69.1
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 4.0e-83 312.0 243 71.2
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 5.3e-83 311.6 242 68.6
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 5.3e-83 311.6 244 69.3
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 6.9e-83 311.2 243 69.5
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.5e-82 310.1 245 69.4
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.5e-82 310.1 245 69.4
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 3.4e-82 308.9 234 71.8
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 4.4e-82 308.5 223 72.2
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 9.9e-82 307.4 245 69.0
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.3e-81 307.0 254 66.9
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 2.2e-81 306.2 239 68.2
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 3.8e-81 305.4 242 69.0
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 4.9e-81 305.1 227 70.5
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.1e-80 303.9 242 66.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.1e-80 303.9 253 65.6
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.4e-80 303.5 243 70.4
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 2.4e-80 302.8 221 71.5
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 3.2e-80 302.4 243 67.9
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.6e-79 300.1 243 65.4
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 2.1e-79 299.7 243 67.9
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.1e-79 299.7 233 67.8
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.7e-79 299.3 244 66.0
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.7e-79 299.3 244 67.6
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 6.0e-79 298.1 242 66.1
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.0e-78 297.4 246 66.3
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.7e-78 296.6 229 69.0
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.0e-78 295.8 239 66.9
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 3.0e-78 295.8 243 66.3
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 5.1e-78 295.0 246 65.9
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 1.1e-77 293.9 244 65.6
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.5e-77 292.7 217 71.9
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 5.6e-77 291.6 248 64.9
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 9.6e-77 290.8 242 66.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.3e-76 290.4 243 64.2
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.6e-76 290.0 243 65.8
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.6e-76 290.0 237 65.4
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.6e-76 290.0 242 65.3
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.6e-76 290.0 248 64.5
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.1e-76 289.7 243 64.2
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 3.6e-76 288.9 226 67.3
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 4.8e-76 288.5 221 71.0
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 4.8e-76 288.5 248 63.7
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 6.2e-76 288.1 208 72.1
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 8.1e-76 287.7 243 65.0
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 8.1e-76 287.7 243 65.0
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 1.1e-75 287.3 243 65.0
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.1e-75 287.3 243 65.0
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 1.1e-75 287.3 243 65.0
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.4e-75 287.0 243 66.7
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.8e-75 286.6 243 64.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 2.4e-75 286.2 243 64.6
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.4e-75 286.2 204 74.0
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.5e-74 283.5 215 70.2
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 5.8e-74 281.6 245 62.9
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 5.8e-74 281.6 249 61.4
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.3e-73 280.4 249 61.0
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.9e-72 276.6 243 64.6
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 3.5e-71 272.3 255 60.4
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.8e-70 270.0 242 61.6
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.3e-70 269.6 219 63.0
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.9e-69 266.5 221 61.1
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 9.6e-69 264.2 240 60.0
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.3e-65 253.8 212 63.2
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.8e-65 252.3 236 58.9
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 6.5e-65 251.5 232 59.9
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 6.7e-62 241.5 185 68.1
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.3e-60 237.3 211 58.8
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.3e-60 237.3 246 56.5
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 5.3e-59 231.9 210 57.1
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 2.0e-58 229.9 220 56.8
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 8.4e-57 224.6 172 69.2
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 7.9e-55 218.0 206 54.4
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.9e-48 196.8 225 48.0
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 2.4e-43 179.9 157 66.2
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.2e-40 169.1 221 46.6
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.0e-38 164.5 163 57.7
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.2e-36 156.8 99 83.8
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 2.5e-32 143.3 123 63.4
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 4.0e-30 136.0 232 40.5
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 7.5e-29 131.7 119 62.2
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.1e-24 117.9 78 78.2
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.0e-22 109.8 209 37.3
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.2e-12 77.0 210 28.1
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 2.7e-10 70.1 59 62.7
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 1.3e-09 67.8 46 76.1
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.3e-09 67.8 52 69.2


User provided reference genes

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