Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G001990 Citrullus lanatus HOM05D005006 ORTHO05D005903 4.1e-81 304.7 156 100.0
MELO3C005742.2 Cucumis melo HOM05D005006 ORTHO05D005903 8.1e-61 237.3 159 81.8
CsaV3_5G002120 Cucumis sativus L. HOM05D005006 ORTHO05D005903 6.4e-58 227.6 162 79.6
Sed0013874 Sechium edule HOM05D005006 ORTHO05D005903 2.5e-41 172.6 160 66.2
FAN13G1208 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.6e-37 159.8 153 59.5
FAN18G0263 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.6e-37 159.8 153 59.5
FAN18G2980 Fragaria x ananassa HOM05D005006 ORTHO05D005903 2.2e-37 159.5 153 59.5
FvH4_5g04150 Fragaria vesca HOM05D005006 ORTHO05D005903 3.7e-37 158.7 153 59.5
CiPaw.11G123200 Carya illinoinensis HOM05D005006 ORTHO05D005903 1.8e-36 156.4 154 59.7
Haze_08652 Corylus avellana HOM05D005006 ORTHO05D005903 6.9e-36 154.5 154 59.1
Haze_08651 Corylus avellana HOM05D005006 ORTHO05D005903 1.5e-35 153.3 154 58.4
RcHm_v2.0_Chr7g0195351 Rosa chinensis HOM05D005006 ORTHO05D005903 1.5e-35 153.3 162 56.2
CANSAT21G0143 Cannabis sativa HOM05D005006 ORTHO05D005903 3.8e-34 148.7 169 57.4
Solyc08g082090.1 Solanum lycopersicum HOM05D005006 ORTHO05D005903 8.5e-34 147.5 161 55.3
Cc08_g15850 Coffea canephora HOM05D005006 ORTHO05D005903 1.4e-33 146.7 178 54.5
Cfa012825 Carpinus fangiana HOM05D005006 ORTHO05D005903 1.9e-33 146.4 154 57.8
PGSC0003DMG400012296 Solanum tuberosum HOM05D005006 ORTHO05D005903 1.9e-33 146.4 161 54.0
Manes.02G011900 Manihot esculenta HOM05D005006 ORTHO05D005903 3.2e-33 145.6 145 60.0
Potri.001G093500 Populus trichocarpa HOM05D005006 ORTHO05D005903 3.2e-33 145.6 146 56.8
Sopen08g030380 Solanum pennellii HOM05D005006 ORTHO05D005903 3.2e-33 145.6 155 56.1
Sed0010968 Sechium edule HOM05D005006 ORTHO05D005903 2.7e-32 142.5 153 57.5
QL02p031286 Quercus lobata HOM05D005006 ORTHO05D005903 7.9e-32 141.0 141 57.4
Actinidia01391 Actinidia chinensis HOM05D005006 ORTHO05D005903 2.3e-31 139.4 162 51.9
Dinv37546 Davidia involucrata HOM05D005006 ORTHO05D005903 3.9e-31 138.7 158 57.6
Manes.01G045300 Manihot esculenta HOM05D005006 ORTHO05D005903 3.9e-31 138.7 161 50.9
Nitab4.5_0007099g0020 Nicotiana tabacum HOM05D005006 ORTHO05D005903 1.1e-30 137.1 148 53.4
TAR629G3139 Trochodendron aralioides HOM05D005006 ORTHO05D005903 2.0e-30 136.3 154 54.5
SGA_v2.0_scaffold111G31421 Striga asiatica HOM05D005006 ORTHO05D005903 2.5e-30 136.0 148 54.1
Duzib084G0720 Durio zibethinus HOM05D005006 ORTHO05D005903 1.7e-29 133.3 151 53.0
LjContig00312_ERROPOS870357g0014674 Lotus japonicus HOM05D005006 ORTHO05D005903 2.8e-29 132.5 164 53.7
Glyma.01G224600 Glycine max HOM05D005006 ORTHO05D005903 8.2e-29 131.0 166 53.0
COL.COLO4_21708 Corchorus olitorius HOM05D005006 ORTHO05D005903 1.4e-28 130.2 169 48.5
MELO3C016304.2 Cucumis melo HOM05D005006 ORTHO05D005903 1.4e-28 130.2 161 53.4
FAN04G1712 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.4e-28 130.2 139 54.0
FAN04G3134 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.4e-28 130.2 139 54.0
PGR031G0908 Punica granatum HOM05D005006 ORTHO05D005903 1.8e-28 129.8 153 54.9
Thecc.03G294000 Theobroma cacao HOM05D005006 ORTHO05D005903 1.8e-28 129.8 149 51.7
Oeu061095.1 Olea europaea HOM05D005006 ORTHO05D005903 2.4e-28 129.4 153 54.2
Rhsim07G0083400 Rhododendron simsii HOM05D005006 ORTHO05D005903 3.1e-28 129.0 154 53.9
Ciclev10022492m.g Citrus clementina HOM05D005006 ORTHO05D005903 6.9e-28 127.9 151 54.3
Gohir.A08G085100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 6.9e-28 127.9 146 51.4
TWI15G0537 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 6.9e-28 127.9 157 49.7
Duzib068G0822 Durio zibethinus HOM05D005006 ORTHO05D005903 9.1e-28 127.5 149 51.7
Prupe.5G116000 Prunus persica HOM05D005006 ORTHO05D005903 9.1e-28 127.5 173 48.6
ClCG07G014930 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.5e-27 126.7 163 49.7
ClCG10G009270 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.5e-27 126.7 163 49.7
Eucgr.D01714 Eucalyptus grandis HOM05D005006 ORTHO05D005903 7.7e-27 124.4 156 51.9
Gohir.D08G132000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 7.7e-27 124.4 147 52.4
Gorai.004G134900 Gossypium raimondii HOM05D005006 ORTHO05D005903 7.7e-27 124.4 147 52.4
Aqoxy5G04131 Aquilegia oxysepala HOM05D005006 ORTHO05D005903 1.0e-26 124.0 156 51.9
Sabra01G0069400 Salix brachista HOM05D000089 ORTHO05D003403 1.3e-26 123.6 129 55.8
Sed0017945 Sechium edule HOM05D005006 ORTHO05D005903 1.3e-26 123.6 148 55.4
Glyma.11G018400 Glycine max HOM05D005006 ORTHO05D005903 1.7e-26 123.2 153 52.9
MD14G1122100 Malus domestica HOM05D005006 ORTHO05D005903 2.2e-26 122.9 182 47.3
TWI81G0332 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 2.2e-26 122.9 144 52.8
BcaC08g44558 Brassica carinata HOM05D005006 ORTHO05D005903 1.1e-25 120.6 172 47.1
MBI07_g24340_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 1.1e-25 120.6 149 51.0
MD06G1103200 Malus domestica HOM05D005006 ORTHO05D005903 1.1e-25 120.6 178 46.6
Atru.chr9.2028 Acer truncatum HOM05D005006 ORTHO05D005903 1.4e-25 120.2 159 49.7
Atru.chr9.2036 Acer truncatum HOM05D005006 ORTHO05D005903 1.4e-25 120.2 159 49.7
BraA07t29781Z Brassica rapa HOM05D005006 ORTHO05D005903 2.5e-25 119.4 174 47.7
Hma1.2p1_0359F.1_g135340 Hydrangea macrophylla HOM05D005006 ORTHO05D005903 2.5e-25 119.4 170 51.2
C06p20240 Brassica napus HOM05D005006 ORTHO05D005903 3.2e-25 119.0 172 47.7
BolC6t37205H Brassica oleracea HOM05D005006 ORTHO05D005903 3.2e-25 119.0 172 47.7
Phvul.002G296900 Phaseolus vulgaris HOM05D005006 ORTHO05D005903 3.2e-25 119.0 165 48.5
A07p20950 Brassica napus HOM05D005006 ORTHO05D005903 4.2e-25 118.6 174 47.7
Nn1g01823 Nelumbo nucifera HOM05D005006 ORTHO05D005903 4.2e-25 118.6 157 50.3
Cpa.g.sc775.1 Carica papaya HOM05D005006 ORTHO05D005903 5.5e-25 118.2 155 49.0
Lsat_1_v5_gn_6_85661 Lactuca sativa HOM05D005006 ORTHO05D005903 7.2e-25 117.9 156 49.4
Sc22g0005120 Simmondsia chinensis HOM05D005006 ORTHO05D005903 2.1e-24 116.3 134 53.0
AL7G47430 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 2.7e-24 115.9 172 45.3
AT5G41810 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 2.7e-24 115.9 172 46.5
Atru.chr2.764 Acer truncatum HOM05D005006 ORTHO05D005903 3.6e-24 115.5 159 49.1
Psat0s4474g0040 Pisum sativum HOM05D005006 ORTHO05D005903 4.7e-24 115.2 153 46.4
Sp7g00270 Schrenkiella parvula HOM05D005006 ORTHO05D005903 4.7e-24 115.2 166 48.8
CsaV3_4G006460 Cucumis sativus L. HOM05D005006 ORTHO05D005903 6.1e-24 114.8 169 49.1
BcaB02g07876 Brassica carinata HOM05D005006 ORTHO05D005903 7.9e-24 114.4 174 46.6
HanXRQChr03g0085171 Helianthus annuus HOM05D005006 ORTHO05D005903 7.9e-24 114.4 143 52.4
VMungo0251G1458 Vigna mungo HOM05D005006 ORTHO05D005903 1.0e-23 114.0 189 43.9
Carub.0007s3356 Capsella rubella HOM05D005006 ORTHO05D005903 1.8e-23 113.2 186 44.6
Lsat_1_v5_gn_6_11781 Lactuca sativa HOM05D005006 ORTHO05D005903 3.0e-23 112.5 150 48.7
HanXRQChr07g0191041 Helianthus annuus HOM05D005006 ORTHO05D005903 3.9e-23 112.1 155 47.7
TPR.G6668 Trifolium pratense HOM05D005006 ORTHO05D005903 3.9e-23 112.1 166 47.6
CSS0014692 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 5.1e-23 111.7 163 46.0
CARHR212760 Cardamine hirsuta HOM05D005006 ORTHO05D005903 5.1e-23 111.7 169 45.6
DCAR_027715 Daucus carota HOM05D005006 ORTHO05D005903 5.1e-23 111.7 171 48.5
MSTRG.13880 Avicennia marina HOM05D005006 ORTHO05D005903 1.1e-22 110.5 152 50.0
Glyma.05G215700 Glycine max HOM05D005006 ORTHO05D005903 1.1e-22 110.5 170 43.5
CSS0022093 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.5e-22 110.2 155 47.1
AUR62010816 Chenopodium quinoa HOM05D005006 ORTHO05D005903 2.0e-22 109.8 160 45.6
Psat7g027080 Pisum sativum HOM05D005006 ORTHO05D005903 2.6e-22 109.4 158 46.8
Carub.0002s0046 Capsella rubella HOM05D005006 ORTHO05D005903 4.4e-22 108.6 151 47.7
Glyma.08G021800 Glycine max HOM05D005006 ORTHO05D005903 5.7e-22 108.2 173 42.2
Rhsim02G0241500 Rhododendron simsii HOM05D005006 ORTHO05D005903 5.7e-22 108.2 164 43.3
VMungo1215G3249 Vigna mungo HOM05D005266 ORTHO05D006416 5.7e-22 108.2 151 47.0
Medtr8g099340 Medicago truncatula HOM05D005006 ORTHO05D005903 1.7e-21 106.7 180 42.8
Medtr5g009490 Medicago truncatula HOM05D005006 ORTHO05D005903 2.2e-21 106.3 180 43.3
THA.LOC104809339 Tarenaya hassleriana HOM05D005006 ORTHO05D005903 6.3e-21 104.8 186 44.1
Lj4g0012980 Lotus japonicus HOM05D005006 ORTHO05D005903 1.4e-20 103.6 168 44.6
ECA240G3705 Erigeron canadensis HOM05D005006 ORTHO05D005903 1.8e-20 103.2 169 47.3
Peaxi162Scf00074g01119 Petunia axillaris HOM05D005006 ORTHO05D005903 2.4e-20 102.8 138 44.9
Ca_17490_v3 Cicer arietinum L. HOM05D005006 ORTHO05D005903 9.1e-20 100.9 180 42.2
MBI06_g32753_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 1.2e-19 100.5 145 51.0
ECA233G6185 Erigeron canadensis HOM05D005006 ORTHO05D005903 2.0e-19 99.8 173 39.9
Manes.02G012001 Manihot esculenta HOM05D005006 ORTHO05D005903 2.6e-19 99.4 140 48.6
Aa31LG9G320 Aethionema arabicum HOM05D005006 ORTHO05D005903 4.5e-19 98.6 157 44.6
Thhalv10023644m.g Eutrema salsugineum HOM05D005006 ORTHO05D005903 4.5e-19 98.6 147 45.6
AL2G10550 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 7.7e-19 97.8 147 45.6
ClCG11G005390 Citrullus lanatus HOM05D000189 ORTHO05D006628 1.7e-18 96.7 133 48.9
Lalb_Chr05g0224201 Lupinus albus HOM05D005006 ORTHO05D005903 1.7e-18 96.7 187 41.2
A09p14260 Brassica napus HOM05D005006 ORTHO05D005903 3.8e-18 95.5 147 45.6
BcaC04g22629 Brassica carinata HOM05D005006 ORTHO05D005903 5.0e-18 95.1 147 46.9
C09p17190 Brassica napus HOM05D005006 ORTHO05D005903 6.5e-18 94.7 146 46.6
BolC9t54617H Brassica oleracea HOM05D005006 ORTHO05D005903 6.5e-18 94.7 146 46.6
Peaxi162Scf00117g00128 Petunia axillaris HOM05D005006 ORTHO05D005903 1.9e-17 93.2 137 45.3
BraA09t37075Z Brassica rapa HOM05D005006 ORTHO05D005903 2.5e-17 92.8 145 44.1
Sp2g00420 Schrenkiella parvula HOM05D005006 ORTHO05D005903 5.5e-17 91.7 144 41.0
Dinv38852 Davidia involucrata HOM05D005006 ORTHO05D005903 1.6e-16 90.1 150 43.3
Sc01g0010170 Simmondsia chinensis HOM05D005006 ORTHO05D005903 1.8e-15 86.7 142 43.7
Phvul.002G163200 Phaseolus vulgaris HOM05D005006 ORTHO05D005903 2.3e-15 86.3 107 49.5
AT1G64340 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 3.0e-15 85.9 152 40.8
PGR042G1559 Punica granatum HOM05D005006 ORTHO05D005903 3.0e-15 85.9 139 43.9
BcaB07g31512 Brassica carinata HOM05D005006 ORTHO05D005903 3.9e-15 85.5 143 45.5
ClCG01G011510 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.3e-13 80.5 96 51.0
ClCG05G010200 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.3e-13 80.5 96 51.0
ClCG07G009600 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.3e-13 80.5 96 51.0
Gohir.A11G024100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 8.2e-13 77.8 123 40.7
Gohir.A12G235100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 5.9e-11 71.6 122 41.8
ATR0589G111 Amborella trichopoda HOM05D005006 ORTHO05D005903 7.7e-11 71.2 165 35.8
PSO729G0067 Papaver somniferum HOM05D005006 ORTHO05D005903 3.8e-10 68.9 132 40.9
PSO724G0350 Papaver somniferum HOM05D005006 ORTHO05D005903 1.5e-09 67.0 127 41.7
Gohir.D12G236200 Gossypium hirsutum HOM05D005006 ORTHO05D005903 1.9e-09 66.6 123 38.2
Gorai.008G253000 Gossypium raimondii HOM05D005006 ORTHO05D005903 1.9e-09 66.6 123 38.2
Nn3g19068 Nelumbo nucifera HOM05D005006 ORTHO05D005903 2.5e-09 66.2 83 51.8
SalBow1G2562 Salvia bowleyana HOM05D005006 ORTHO05D005903 4.2e-09 65.5 109 39.4
SalBow1G1740 Salvia bowleyana HOM05D005006 ORTHO05D005903 5.5e-09 65.1 109 39.4
SGA_v2.0_scaffold173G39083 Striga asiatica HOM05D005006 ORTHO05D005903 5.5e-09 65.1 51 66.7
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 5.5e-09 65.1 82 52.4
PSO724G0798 Papaver somniferum HOM05D005006 ORTHO05D005903 1.6e-08 63.5 162 37.7
PSO724G1125 Papaver somniferum HOM05D005006 ORTHO05D005903 1.6e-08 63.5 162 37.7
CSS0044305 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 2.7e-08 62.8 76 52.6
Gohir.A02G102000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 3.6e-08 62.4 117 41.9
Gohir.D03G082400 Gossypium hirsutum HOM05D005006 ORTHO05D005903 3.6e-08 62.4 125 40.0
Gorai.003G081300 Gossypium raimondii HOM05D005006 ORTHO05D005903 3.6e-08 62.4 125 40.0
EL10Ac5g12894 Beta vulgaris HOM05D005006 ORTHO05D005903 4.7e-08 62.0 114 38.6
Rhsim02G0241700 Rhododendron simsii HOM05D000089 ORTHO05D003403 2.3e-07 59.7 79 48.1
Os06g0525200 Oryza sativa ssp. japonica HOM05D005006 ORTHO05D005903 5.2e-07 58.5 41 65.9
Ah.12g052340 Amaranthus hybridus HOM05D005006 ORTHO05D005903 4.4e-06 55.5 127 33.9
AUR62019816 Chenopodium quinoa HOM05D005006 ORTHO05D005903 4.4e-06 55.5 62 48.4
Zm00001eb382950 Zea mays HOM05D005006 ORTHO05D005903 4.4e-06 55.5 161 31.7
CSS0044713 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 9.7e-06 54.3 133 34.6


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