Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.7e-140 502.7 262 100.0
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 9.3e-118 427.2 262 86.3
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.7e-103 379.8 265 78.9
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 7.4e-99 364.4 214 89.7
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 7.5e-67 258.1 255 57.6
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 7.0e-65 251.5 263 55.9
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 9.1e-65 251.1 252 60.3
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.2e-64 250.8 258 57.8
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 1.6e-64 250.4 228 59.6
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 2.7e-64 249.6 257 56.4
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 2.2e-63 246.5 250 54.8
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 2.5e-62 243.0 248 56.9
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 3.2e-62 242.7 243 55.1
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.2e-61 240.7 240 56.2
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 2.1e-61 240.0 209 59.3
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 2.7e-61 239.6 255 54.5
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 3.0e-60 236.1 246 55.7
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 4.0e-60 235.7 257 56.0
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 4.0e-60 235.7 257 56.0
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 3.4e-59 232.6 242 55.0
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 6.3e-58 228.4 220 54.1
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 8.3e-58 228.0 249 56.6
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.1e-57 227.6 217 56.7
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.1e-57 226.1 238 56.3
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.1e-57 225.7 232 54.3
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 5.4e-57 225.3 229 54.6
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 7.7e-56 221.5 239 53.1
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.0e-55 221.1 257 51.0
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 1.3e-55 220.7 246 52.4
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 1.7e-55 220.3 239 53.1
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.7e-55 220.3 243 52.3
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 8.6e-55 218.0 233 54.5
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.1e-54 217.6 238 51.7
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 3.3e-54 216.1 244 52.0
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 7.2e-54 214.9 256 50.8
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.2e-53 214.2 233 55.4
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.2e-53 214.2 246 51.2
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 2.1e-53 213.4 265 49.8
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 3.6e-53 212.6 266 50.0
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.0e-52 211.1 236 52.1
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 1.0e-52 211.1 243 51.4
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 1.8e-52 210.3 248 52.0
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 4.0e-52 209.1 250 49.2
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 4.0e-52 209.1 256 49.6
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 8.9e-52 208.0 207 54.1
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.2e-51 207.6 266 48.9
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 2.0e-51 206.8 240 52.9
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 3.4e-51 206.1 241 51.0
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 3.4e-51 206.1 211 58.3
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 5.7e-51 205.3 258 52.3
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 2.8e-50 203.0 262 49.6
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.1e-49 201.1 278 46.8
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 1.8e-49 200.3 224 51.8
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 7.0e-49 198.4 258 47.7
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.6e-48 197.2 282 45.0
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.6e-48 197.2 228 51.3
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.0e-48 196.8 250 47.6
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.7e-48 196.4 204 52.0
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 3.5e-48 196.1 239 50.2
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 5.9e-48 195.3 209 53.6
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 7.8e-48 194.9 204 54.9
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.0e-47 194.5 205 54.1
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 1.3e-47 194.1 299 45.2
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 1.7e-47 193.7 208 52.4
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 3.9e-47 192.6 188 54.3
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 1.5e-46 190.7 177 59.9
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.5e-46 190.7 220 48.6
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.5e-46 190.7 264 47.0
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 3.3e-46 189.5 190 57.9
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 3.3e-46 189.5 185 57.8
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.3e-46 189.1 194 54.1
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 5.6e-46 188.7 179 58.7
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 5.6e-46 188.7 214 51.4
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 5.6e-46 188.7 264 46.2
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 5.6e-46 188.7 193 55.4
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.2e-45 187.6 185 56.2
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 2.1e-45 186.8 206 49.0
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 2.8e-45 186.4 238 48.7
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 4.7e-45 185.7 191 56.5
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 6.1e-45 185.3 238 48.7
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 8.0e-45 184.9 259 45.6
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 8.0e-45 184.9 238 48.3
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.0e-44 184.5 213 52.1
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 1.4e-44 184.1 165 58.8
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.8e-44 183.7 165 60.0
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 1.8e-44 183.7 165 58.8
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 2.3e-44 183.3 203 53.7
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 4.0e-44 182.6 185 56.8
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 4.0e-44 182.6 229 49.3
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 6.8e-44 181.8 219 49.8
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 8.9e-44 181.4 255 45.9
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 1.5e-43 180.6 211 50.7
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 2.0e-43 180.3 203 50.7
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.0e-43 180.3 234 48.3
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 2.6e-43 179.9 190 55.3
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 2.6e-43 179.9 190 55.3
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 2.6e-43 179.9 193 53.4
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 3.4e-43 179.5 174 56.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 7.5e-43 178.3 200 53.0
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 2.2e-42 176.8 254 46.5
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.4e-41 174.1 235 42.6
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 1.9e-41 173.7 189 54.5
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 7.0e-41 171.8 253 45.1
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 1.0e-39 167.9 210 49.0
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 1.7e-39 167.2 233 43.8
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 3.3e-38 162.9 208 47.1
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 4.0e-36 156.0 135 57.8
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 3.4e-35 152.9 182 46.7
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 2.4e-33 146.7 199 44.7
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 4.6e-32 142.5 188 47.9
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 3.9e-31 139.4 126 54.8
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.9e-31 139.4 148 54.1
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 6.6e-31 138.7 155 49.7
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 9.5e-30 134.8 114 56.1
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 8.9e-28 128.3 258 39.1
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 2.0e-27 127.1 89 66.3
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 1.1e-25 121.3 252 38.1
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 5.4e-25 119.0 145 42.8
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 4.6e-24 115.9 145 44.8
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 4.6e-24 115.9 99 57.6
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.7e-23 114.0 84 66.7
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 9.6e-14 81.6 120 48.3
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 3.6e-13 79.7 91 49.5


User provided reference genes

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