Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 4.1e-35 151.0 83 100.0
CsaV3_5G001550 Cucumis sativus L. HOM05D008304 ORTHO05D004056 4.5e-26 120.9 79 89.9
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 3.8e-25 117.9 83 78.3
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 3.8e-17 91.3 83 61.4
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 3.8e-17 91.3 82 61.0
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 8.5e-17 90.1 86 64.0
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 1.1e-16 89.7 86 64.0
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 4.7e-15 84.3 88 53.4
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 6.1e-15 84.0 88 60.2
Sed0024309 Sechium edule HOM05D008304 ORTHO05D004056 6.1e-15 84.0 81 70.4
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 1.4e-14 82.8 89 57.3
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 3.0e-14 81.6 88 58.0
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 4.0e-14 81.3 90 56.7
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 5.2e-14 80.9 83 61.4
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 5.2e-14 80.9 85 57.6
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 1.2e-13 79.7 83 61.4
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 1.5e-13 79.3 83 57.8
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 3.4e-13 78.2 87 57.5
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 3.4e-13 78.2 83 59.0
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 5.7e-13 77.4 97 53.6
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 9.8e-13 76.6 84 59.5
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 1.3e-12 76.3 83 57.8
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 1.7e-12 75.9 83 57.8
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 1.1e-11 73.2 92 55.4
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 1.4e-11 72.8 83 56.6
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.4e-11 72.8 83 56.6
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.4e-11 72.8 83 56.6
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 1.4e-11 72.8 83 56.6
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 2.4e-11 72.0 83 54.2
PGR042G2542 Punica granatum HOM05D008304 ORTHO05D004056 2.4e-11 72.0 84 63.1
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 2.4e-11 72.0 86 53.5
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 3.1e-11 71.6 83 53.0
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 3.1e-11 71.6 83 55.4
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 5.4e-11 70.9 83 56.6
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 9.1e-11 70.1 83 54.2
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 1.2e-10 69.7 91 54.9
Gohir.D09G182600 Gossypium hirsutum HOM05D008304 ORTHO05D004056 3.5e-10 68.2 83 49.4
Gorai.006G204900 Gossypium raimondii HOM05D008304 ORTHO05D004056 3.5e-10 68.2 83 49.4
Gohir.A09G187800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 5.9e-10 67.4 83 49.4
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 5.9e-10 67.4 83 50.6
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 5.9e-10 67.4 83 50.6
Peaxi162Scf00074g00131 Petunia axillaris HOM05D008304 ORTHO05D004056 1.0e-09 66.6 88 53.4
Migut.E00724 Erythranthe guttata HOM05D008304 ORTHO05D004056 1.3e-09 66.2 83 50.6
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 1.3e-09 66.2 84 51.2
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 1.3e-09 66.2 83 51.8
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.9e-09 65.1 83 49.4
Nn1g00437 Nelumbo nucifera HOM05D008304 ORTHO05D004056 5.0e-09 64.3 83 48.2
Eucgr.D01660 Eucalyptus grandis HOM05D008304 ORTHO05D004056 8.5e-09 63.5 80 48.8
Ciclev10023139m.g Citrus clementina HOM05D008304 ORTHO05D004056 1.5e-08 62.8 86 53.5
MBI02_g46466_MAGBIO Magnolia biondii HOM05D056943 ORTHO05D004056 5.5e-08 60.8 83 49.4
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 5.5e-08 60.8 86 50.0
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.6e-07 59.3 83 47.0
MBI02_g42223_MAGBIO Magnolia biondii HOM05D056943 ORTHO05D004056 2.1e-07 58.9 83 49.4
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 3.6e-07 58.2 86 48.8
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 3.6e-07 58.2 84 51.2
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 3.6e-07 58.2 83 49.4
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 6.1e-07 57.4 84 47.6
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 6.1e-07 57.4 84 47.6
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 8.0e-07 57.0 88 46.6
CAN.G567.106 Capsicum annuum HOM05D008304 ORTHO05D004056 1.4e-06 56.2 80 50.0
CDE02G2683 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 1.4e-06 56.2 86 45.3
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.8e-06 55.8 88 45.5
Potri.011G151900 Populus trichocarpa HOM05D008304 ORTHO05D004056 1.8e-06 55.8 85 44.7
HanXRQChr07g0192251 Helianthus annuus HOM05D010428 ORTHO05D012179 4.0e-06 54.7 81 48.1
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 4.0e-06 54.7 83 47.0
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 6.8e-06 53.9 75 46.7
Psat2g130600 Pisum sativum HOM05D008304 ORTHO05D004056 8.8e-06 53.5 85 44.7
RcHm_v2.0_Chr7g0187581 Rosa chinensis HOM05D008304 ORTHO05D004056 8.8e-06 53.5 37 70.3


User provided reference genes

Program Settings