Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 5.3e-162 574.3 297 100.0
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 4.4e-148 528.1 296 91.6
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 2.4e-138 495.7 297 85.2
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.9e-107 391.7 304 67.4
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 4.9e-107 391.7 314 66.2
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.1e-106 390.6 295 66.8
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.1e-106 390.6 296 67.9
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.4e-106 389.4 295 67.5
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.4e-106 388.3 304 66.8
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 2.7e-105 386.0 304 66.4
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.7e-105 386.0 304 66.4
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.6e-105 385.2 295 66.8
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 6.0e-105 384.8 301 66.8
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 6.0e-105 384.8 300 67.7
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.0e-104 382.5 301 66.4
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.1e-104 381.7 297 65.7
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 5.1e-104 381.7 306 64.1
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.5e-103 379.4 299 66.2
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 1.6e-102 376.7 296 65.9
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 2.1e-102 376.3 305 65.6
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 6.2e-102 374.8 307 63.2
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 8.1e-102 374.4 309 63.1
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.1e-101 374.0 295 65.4
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 9.9e-100 367.5 314 62.7
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 2.9e-99 365.9 295 62.4
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 6.4e-99 364.8 297 62.6
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 8.4e-99 364.4 296 63.5
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.4e-98 363.6 295 62.7
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 3.2e-98 362.5 297 64.0
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 7.1e-98 361.3 306 61.1
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 2.7e-97 359.4 294 62.9
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 4.6e-97 358.6 253 70.4
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 7.8e-97 357.8 296 62.2
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.0e-96 357.5 317 61.5
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.0e-96 357.5 296 62.5
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 3.0e-96 355.9 298 62.1
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 3.9e-96 355.5 296 61.1
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 5.1e-96 355.1 297 61.6
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 6.6e-96 354.8 337 57.6
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.1e-95 354.0 296 61.8
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.5e-95 353.6 292 62.0
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.9e-95 353.2 295 61.7
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 2.5e-95 352.8 296 60.1
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 7.3e-95 351.3 296 60.5
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 7.3e-95 351.3 299 61.2
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 7.3e-95 351.3 295 63.7
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 9.6e-95 350.9 298 60.4
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 9.6e-95 350.9 298 60.4
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 9.6e-95 350.9 295 62.0
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.3e-94 350.5 308 61.4
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.3e-94 350.5 302 60.6
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 5.3e-93 345.1 311 61.1
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 9.0e-93 344.4 303 59.1
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 3.4e-92 342.4 298 60.1
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 4.5e-92 342.0 316 58.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 1.3e-91 340.5 300 60.3
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.1e-90 337.4 316 57.6
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.1e-90 337.4 316 57.6
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 1.1e-90 337.4 298 59.7
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.4e-90 337.0 316 57.6
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.4e-90 337.0 316 57.6
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.4e-90 337.0 297 60.6
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 1.9e-90 336.7 298 61.1
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.9e-90 336.7 298 59.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 3.2e-90 335.9 316 57.6
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 3.2e-90 335.9 316 57.6
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 4.2e-90 335.5 316 58.5
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 3.5e-89 332.4 317 58.0
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 4.6e-89 332.0 315 57.5
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 3.0e-88 329.3 308 58.4
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.7e-88 328.2 302 58.3
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 8.7e-88 327.8 316 57.0
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.9e-87 326.6 304 58.6
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 3.3e-87 325.9 298 57.0
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 6.2e-86 321.6 312 55.4
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.4e-85 320.5 305 57.7
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.4e-85 319.7 301 56.8
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 2.4e-85 319.7 295 58.0
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 7.6e-84 314.7 315 55.9
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.3e-83 313.9 308 55.5
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 2.9e-83 312.8 309 55.3
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 2.5e-82 309.7 304 56.2
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 2.5e-82 309.7 298 54.7
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 9.3e-82 307.8 284 56.3
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.3e-80 303.9 266 60.2
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.1e-79 300.8 297 56.9
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 2.6e-76 289.7 300 54.7
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.0e-75 287.7 279 57.0
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.3e-75 287.3 295 55.3
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 1.7e-75 287.0 265 54.7
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.2e-75 286.6 298 53.7
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 8.4e-75 284.6 258 57.8
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 2.5e-74 283.1 296 54.4
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 6.0e-73 278.5 206 68.0
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 5.1e-72 275.4 312 50.6
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 3.3e-71 272.7 282 52.8
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 5.7e-71 271.9 305 51.1
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 5.3e-69 265.4 310 50.0
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.7e-65 253.1 295 49.8
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 2.5e-63 246.5 204 62.3
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.7e-59 233.8 234 52.6
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 4.2e-58 229.2 243 53.5
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.4e-53 213.4 302 43.7
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 4.7e-49 199.1 272 46.0
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.3e-48 196.8 306 42.5
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.5e-47 194.1 291 43.0
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 4.8e-46 189.1 187 52.9
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.2e-44 184.5 207 48.3
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 4.5e-44 182.6 277 43.0
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 6.5e-43 178.7 299 40.1
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 2.1e-41 173.7 306 41.2
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.5e-39 167.5 133 63.9
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 9.7e-39 164.9 177 52.0
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.4e-37 160.2 130 63.8
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 7.0e-37 158.7 298 37.6
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.2e-36 157.9 298 37.6
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.5e-34 151.0 304 36.2
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 9.4e-34 148.3 127 61.4
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 1.3e-30 137.9 120 60.0
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.3e-30 135.6 225 39.6
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.4e-29 133.7 178 43.8
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 3.3e-26 123.2 140 52.1
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 4.2e-26 122.9 120 54.2
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.5e-23 114.4 150 45.3
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.6e-23 113.6 121 51.2
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.7e-22 110.9 92 59.8
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.8e-21 107.5 158 44.9
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 8.6e-19 98.6 125 45.6
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 9.5e-18 95.1 100 52.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 3.6e-17 93.2 81 55.6
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.9e-13 80.9 102 49.0
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 2.8e-09 67.0 64 57.8


User provided reference genes

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