Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 3.3e-151 538.5 305 100.0
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 2.1e-84 316.6 292 65.8
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 3.7e-65 252.7 292 56.8
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 5.2e-27 125.9 149 52.3
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 1.5e-26 124.4 293 37.5
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 2.0e-26 124.0 148 54.1
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 5.7e-26 122.5 139 53.2
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 2.8e-25 120.2 141 55.3
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 6.3e-25 119.0 142 54.9
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 8.2e-25 118.6 139 55.4
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 8.2e-25 118.6 139 55.4
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 1.4e-24 117.9 157 51.6
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 1.4e-24 117.9 118 61.0
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 3.1e-24 116.7 299 36.1
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.1e-24 116.7 139 54.0
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 1.2e-23 114.8 149 53.0
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 8.5e-22 108.6 156 45.5
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 1.1e-21 108.2 144 49.3
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 2.5e-21 107.1 145 50.3
MELO3C033023.2 Cucumis melo HOM05D007490 ORTHO05D008750 4.2e-21 106.3 103 61.2
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 4.2e-21 106.3 142 53.5
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 7.2e-21 105.5 143 53.1
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.7e-20 103.6 317 33.4
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 2.7e-20 103.6 149 48.3
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 2.7e-20 103.6 144 45.8
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 8.0e-20 102.1 146 50.7
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 8.0e-20 102.1 150 49.3
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 1.8e-19 100.9 145 51.0
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 2.3e-19 100.5 142 45.1
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 3.0e-19 100.1 149 47.7
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 3.0e-19 100.1 150 48.0
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 3.0e-19 100.1 144 48.6
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 3.0e-19 100.1 154 42.9
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 4.0e-19 99.8 68 70.6
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 5.2e-19 99.4 142 47.9
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 6.7e-19 99.0 147 43.5
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 6.7e-19 99.0 123 52.8
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 8.8e-19 98.6 153 46.4
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 1.2e-18 98.2 154 48.7
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 1.5e-18 97.8 119 55.5
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 2.0e-18 97.4 150 45.3
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 2.0e-18 97.4 121 57.0
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 2.6e-18 97.1 140 45.7
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 4.4e-18 96.3 127 48.0
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 4.4e-18 96.3 160 43.8
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 4.4e-18 96.3 141 45.4
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 4.4e-18 96.3 150 44.7
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 2.8e-17 93.6 147 46.9
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.7e-17 93.2 151 44.4
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 1.1e-16 91.7 287 33.8
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 4.1e-16 89.7 108 50.0
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 5.3e-16 89.4 62 71.0
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 5.3e-16 89.4 297 33.3
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 5.3e-16 89.4 154 41.6
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 9.1e-16 88.6 145 42.8
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 2.0e-15 87.4 169 36.7
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.0e-15 87.4 67 64.2
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 2.0e-15 87.4 138 48.6
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 3.5e-15 86.7 70 62.9
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 4.5e-15 86.3 160 37.5
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 4.5e-15 86.3 153 38.6
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 7.7e-15 85.5 164 40.2
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.0e-14 85.1 63 66.7
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 1.7e-14 84.3 152 38.8
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 2.9e-14 83.6 143 40.6
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 5.0e-14 82.8 172 39.5
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 5.0e-14 82.8 148 39.2
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 8.5e-14 82.0 152 37.5
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 1.1e-13 81.6 149 42.3
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 1.9e-13 80.9 156 44.9
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 3.2e-13 80.1 176 37.5
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 3.2e-13 80.1 153 40.5
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 4.7e-12 76.3 154 39.0
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 6.1e-12 75.9 118 47.5
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 6.1e-12 75.9 135 43.0
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 8.0e-12 75.5 128 48.4
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 1.8e-11 74.3 130 44.6
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 1.8e-11 74.3 127 48.8
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 3.0e-11 73.6 79 50.6
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 6.8e-11 72.4 178 32.6
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 1.2e-10 71.6 142 43.0
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.5e-10 71.2 118 46.6
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 1.5e-10 71.2 277 31.8
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 2.6e-10 70.5 285 31.6
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 3.4e-10 70.1 99 49.5
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 5.7e-10 69.3 129 41.1
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 7.5e-10 68.9 106 47.2
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 9.8e-10 68.6 155 34.8
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 2.2e-09 67.4 106 48.1
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 4.8e-09 66.2 133 39.8
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 4.8e-09 66.2 142 42.3
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.3e-09 65.9 79 45.6
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 2.4e-08 63.9 136 41.2
BraA09t40485Z Brassica rapa HOM05D014273 ORTHO05D008750 3.1e-08 63.5 122 43.4
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 7.0e-08 62.4 133 36.8
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.5e-07 60.1 80 43.8
BolC8t50896H Brassica oleracea HOM05D014273 ORTHO05D041832 1.3e-06 58.2 87 47.1
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.8e-06 56.6 118 34.7


User provided reference genes

Program Settings