Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 5.5e-77 290.8 138 100.0
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 5.5e-77 290.8 138 100.0
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 4.8e-65 251.1 135 88.1
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 6.5e-62 240.7 135 85.2
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 2.0e-58 229.2 135 83.7
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.1e-56 223.4 135 80.0
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 8.8e-51 203.8 135 67.4
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 2.0e-50 202.6 134 67.9
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 2.2e-49 199.1 134 64.9
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 3.7e-49 198.4 133 65.4
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 4.8e-49 198.0 134 67.9
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 6.3e-49 197.6 134 67.2
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 6.3e-49 197.6 134 67.2
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 1.8e-48 196.1 134 67.2
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 1.8e-48 196.1 133 63.9
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 4.1e-48 194.9 134 61.2
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 4.1e-48 194.9 133 62.4
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 9.1e-48 193.7 134 62.7
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 1.6e-47 193.0 133 63.9
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.0e-47 192.6 133 60.9
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 4.5e-47 191.4 134 64.9
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 1.0e-46 190.3 134 64.2
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 1.3e-46 189.9 134 62.7
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 5.0e-46 188.0 135 60.7
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 5.0e-46 188.0 135 60.7
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 5.0e-46 188.0 135 63.7
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 1.1e-45 186.8 134 64.2
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 1.5e-45 186.4 134 64.2
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 2.5e-45 185.7 132 62.9
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 2.5e-45 185.7 135 63.7
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 3.2e-45 185.3 134 61.2
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 3.2e-45 185.3 134 63.4
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 4.2e-45 184.9 134 61.2
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 5.5e-45 184.5 132 64.4
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 5.5e-45 184.5 132 64.4
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 5.5e-45 184.5 132 64.4
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 5.5e-45 184.5 134 61.2
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 5.5e-45 184.5 136 61.0
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 7.2e-45 184.1 134 59.7
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 7.2e-45 184.1 134 61.9
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 7.2e-45 184.1 133 61.7
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 9.4e-45 183.7 134 61.9
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 1.2e-44 183.3 133 59.4
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 1.2e-44 183.3 134 61.2
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.2e-44 183.3 134 60.4
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.6e-44 183.0 138 60.9
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 1.6e-44 183.0 134 61.2
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 2.1e-44 182.6 134 60.4
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 2.7e-44 182.2 134 61.2
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 2.7e-44 182.2 128 64.1
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 3.6e-44 181.8 134 61.2
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 4.7e-44 181.4 135 60.0
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 6.1e-44 181.0 135 60.0
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 6.1e-44 181.0 134 61.2
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 8.0e-44 180.6 134 60.4
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 3.0e-43 178.7 133 60.2
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 4.0e-43 178.3 152 55.3
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 4.0e-43 178.3 135 60.0
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.0e-43 178.3 135 59.3
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 2.6e-42 175.6 134 59.7
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 5.7e-42 174.5 133 58.6
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 7.5e-42 174.1 133 60.2
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 9.8e-42 173.7 134 57.5
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 1.3e-41 173.3 133 57.9
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 4.8e-41 171.4 170 47.1
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 8.3e-41 170.6 134 57.5
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 7.0e-40 167.5 133 57.9
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 2.0e-39 166.0 135 54.8
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 2.7e-39 165.6 133 55.6
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 2.7e-39 165.6 131 56.5
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 5.9e-39 164.5 138 56.5
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 2.9e-38 162.2 134 54.5
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 2.5e-37 159.1 112 65.2
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 4.2e-37 158.3 134 58.2
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 5.5e-37 157.9 134 57.5
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.2e-36 156.8 135 49.6
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 2.7e-36 155.6 134 53.0
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 2.3e-35 152.5 132 50.0
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 5.2e-35 151.4 135 51.9
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 5.2e-35 151.4 135 51.9
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 4.4e-34 148.3 133 47.4
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.1e-29 133.7 87 71.3
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 1.6e-28 129.8 138 45.7
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 2.9e-25 119.0 140 40.7
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 6.3e-25 117.9 141 42.6
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 5.4e-24 114.8 99 51.5
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 7.0e-24 114.4 90 61.1
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 1.2e-23 113.6 80 66.2
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 2.9e-22 109.0 139 40.3
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 1.1e-21 107.1 74 64.9
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 2.1e-20 102.8 74 64.9
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 4.0e-19 98.6 141 39.0
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 1.2e-18 97.1 97 45.4
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 4.1e-16 88.6 76 53.9
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 1.9e-13 79.7 58 63.8
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.2e-12 77.0 154 33.1
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 3.1e-11 72.4 74 50.0
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 1.5e-10 70.1 95 41.1
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 2.4e-08 62.8 74 44.6
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 2.7e-07 59.3 150 27.3
SGA_v2.0_scaffold31G12903 Striga asiatica HOM05D005118 ORTHO05D006038 3.5e-07 58.9 151 26.5
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.3e-06 57.0 92 33.7
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.3e-06 57.0 65 46.2
Sp3g13570 Schrenkiella parvula HOM05D005118 ORTHO05D006038 1.3e-06 57.0 129 30.2
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 2.3e-06 56.2 137 29.2
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 2.3e-06 56.2 146 26.7
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 2.3e-06 56.2 91 35.2
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 2.3e-06 56.2 81 38.3
Sabra16G0082800 Salix brachista HOM05D005118 ORTHO05D006038 3.0e-06 55.8 138 25.4
VMungo1309G0892 Vigna mungo HOM05D005118 ORTHO05D006038 3.0e-06 55.8 154 26.0
SalBow3G3316 Salvia bowleyana HOM05D005118 ORTHO05D006038 3.9e-06 55.5 148 25.7
C05p51840 Brassica napus HOM05D005118 ORTHO05D006038 5.1e-06 55.1 94 30.9
BolC5t33871H Brassica oleracea HOM05D005118 ORTHO05D006038 5.1e-06 55.1 94 30.9
Potri.016G078400 Populus trichocarpa HOM05D005118 ORTHO05D006038 5.1e-06 55.1 135 25.2
ATR0618G287 Amborella trichopoda HOM05D005118 ORTHO05D006038 6.6e-06 54.7 142 27.5
BraA05t22230Z Brassica rapa HOM05D005118 ORTHO05D006038 6.6e-06 54.7 94 31.9


User provided reference genes

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