Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG00G002820 Citrullus lanatus HOM05D001607 ORTHO05D001893 5.6e-150 534.3 274 100.0
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 7.4e-142 507.3 268 97.8
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 2.1e-120 436.0 270 86.7
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 4.8e-117 424.9 269 83.6
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 1.7e-106 389.8 268 77.6
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.5e-86 323.6 274 67.9
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.2e-84 315.8 207 78.3
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.4e-84 315.1 278 65.1
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 5.4e-84 315.1 270 66.7
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 2.7e-83 312.8 277 64.6
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.6e-83 312.0 278 64.7
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 5.9e-83 311.6 215 74.4
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.0e-82 310.8 277 64.3
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.0e-82 310.8 278 64.4
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 1.0e-82 310.8 256 67.2
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 1.3e-82 310.5 187 82.4
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 1.7e-82 310.1 231 68.8
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 2.3e-82 309.7 223 73.1
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.9e-82 308.9 277 65.0
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.9e-82 308.9 277 65.0
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 3.9e-82 308.9 263 64.6
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 5.0e-82 308.5 270 65.2
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 5.0e-82 308.5 216 73.1
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 6.6e-82 308.1 208 74.5
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 6.6e-82 308.1 275 64.0
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 1.9e-81 306.6 210 76.2
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 1.9e-81 306.6 220 73.2
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 2.5e-81 306.2 188 79.8
Gohir.D08G110724 Gossypium hirsutum HOM05D001607 ORTHO05D001893 2.5e-81 306.2 220 73.2
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 3.3e-81 305.8 229 69.4
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 5.6e-81 305.1 187 81.8
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 7.3e-81 304.7 266 62.8
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 9.5e-81 304.3 188 80.3
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.2e-80 303.9 256 64.8
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 2.1e-80 303.1 220 70.9
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 2.8e-80 302.8 234 67.9
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 3.6e-80 302.4 208 73.1
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 6.2e-80 301.6 268 61.9
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 6.2e-80 301.6 204 75.5
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 6.2e-80 301.6 204 75.5
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 6.2e-80 301.6 204 75.5
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-79 300.8 186 77.4
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.4e-79 300.4 186 77.4
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 1.4e-79 300.4 220 68.2
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.8e-79 300.1 198 77.3
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 1.8e-79 300.1 249 64.3
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 2.3e-79 299.7 254 66.5
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 2.3e-79 299.7 264 61.4
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 3.1e-79 299.3 241 64.7
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 3.1e-79 299.3 206 72.8
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 5.2e-79 298.5 219 72.1
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 6.8e-79 298.1 213 70.0
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.2e-78 297.4 196 74.5
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 1.2e-78 297.4 207 73.9
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 1.5e-78 297.0 211 71.6
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 2.6e-78 296.2 208 72.1
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 3.4e-78 295.8 251 63.7
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 4.4e-78 295.4 193 75.6
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 4.4e-78 295.4 257 63.4
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 4.4e-78 295.4 188 75.5
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 5.8e-78 295.0 199 74.9
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 5.8e-78 295.0 188 75.5
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 5.8e-78 295.0 217 70.0
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 7.5e-78 294.7 210 72.4
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 2.9e-77 292.7 219 69.4
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 3.7e-77 292.4 265 61.9
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 4.9e-77 292.0 345 53.6
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 4.9e-77 292.0 188 77.7
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 6.4e-77 291.6 273 59.7
arahy.Tifrunner.gnm1.ann1.5UA5U0 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-76 290.8 272 59.6
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 1.4e-76 290.4 228 67.1
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.9e-76 290.0 253 63.6
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.4e-76 289.7 203 70.9
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 2.4e-76 289.7 188 73.4
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 2.4e-76 289.7 205 70.7
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 2.4e-76 289.7 188 75.5
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 1.2e-75 287.3 251 63.3
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 1.2e-75 287.3 256 60.9
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 1.6e-75 287.0 187 76.5
BcaNung04146 Brassica carinata HOM05D001607 ORTHO05D001893 1.6e-75 287.0 182 78.0
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 4.6e-75 285.4 215 67.4
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 7.8e-75 284.6 190 73.7
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 1.0e-74 284.3 184 76.6
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 1.0e-74 284.3 184 76.6
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 1.0e-74 284.3 184 76.6
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 1.0e-74 284.3 182 77.5
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.0e-74 284.3 264 62.9
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 1.3e-74 283.9 271 60.1
Glyma.09G137300 Glycine max HOM05D001607 ORTHO05D001893 1.7e-74 283.5 190 73.2
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 2.3e-74 283.1 188 74.5
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 2.3e-74 283.1 197 72.6
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 3.9e-74 282.3 197 71.6
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 3.9e-74 282.3 187 74.3
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 3.9e-74 282.3 190 73.2
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 5.0e-74 282.0 188 73.9
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 5.0e-74 282.0 207 70.0
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 8.6e-74 281.2 188 73.9
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 8.6e-74 281.2 172 79.1
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 1.1e-73 280.8 277 58.5
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 1.1e-73 280.8 187 73.8
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 1.5e-73 280.4 265 60.0
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.9e-73 280.0 251 64.9
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 2.5e-73 279.6 209 70.8
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 3.3e-73 279.3 188 73.4
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 4.3e-73 278.9 260 61.2
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 4.3e-73 278.9 262 59.5
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 4.3e-73 278.9 182 74.2
CAN.G307.25 Capsicum annuum HOM05D001607 ORTHO05D001893 5.6e-73 278.5 224 66.5
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 7.3e-73 278.1 200 71.0
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 1.2e-72 277.3 266 60.5
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 2.1e-72 276.6 188 72.9
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 4.7e-72 275.4 214 65.4
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 5.2e-71 271.9 194 71.1
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 5.2e-71 271.9 183 72.7
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.4e-70 268.9 261 56.7
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 7.5e-70 268.1 182 72.0
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 9.9e-70 267.7 172 75.6
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.1e-68 264.2 194 71.6
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 2.4e-68 263.1 210 66.2
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 2.1e-67 260.0 180 67.8
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 1.7e-66 256.9 210 65.2
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 5.1e-66 255.4 176 70.5
Actinidia27741 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.5e-65 253.1 172 73.8
Actinidia28326 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.5e-65 253.1 172 73.8
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.2e-64 250.8 183 67.2
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 3.6e-64 249.2 250 57.2
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 4.7e-64 248.8 195 63.1
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 1.1e-63 247.7 210 62.4
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 1.5e-62 243.8 191 61.8
Ca_14559_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 6.4e-61 238.4 145 76.6
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 4.1e-60 235.7 179 63.7
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 6.0e-59 231.9 199 58.8
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.3e-58 230.7 172 66.9
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 4.3e-57 225.7 218 58.7
arahy.Tifrunner.gnm1.ann1.5K396S Arachis hypogaea HOM05D001607 ORTHO05D001893 7.3e-57 224.9 170 67.6
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 5.4e-52 208.8 145 72.4
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 2.7e-51 206.5 164 65.9
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 2.1e-48 196.8 189 55.6
Cre16.g675350 Chlamydomonas reinhardtii HOM05D001607 ORTHO05D001893 1.5e-46 190.7 221 48.9
GSVIVG01020947001 Vitis vinifera HOM05D001607 ORTHO05D001893 4.9e-45 185.7 177 58.8
arahy.Tifrunner.gnm1.ann1.18M8R5 Arachis hypogaea HOM05D001607 ORTHO05D001893 9.6e-41 171.4 153 60.8
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 1.4e-39 167.5 212 50.9
QL93p1997_0001 Quercus lobata HOM05D001607 ORTHO05D001893 1.2e-38 164.5 113 76.1
Sopen00g013600 Solanum pennellii HOM05D001607 ORTHO05D001893 3.0e-34 149.8 115 67.8
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 2.5e-33 146.7 93 75.3
HPP92_006560 Vanilla planifolia HOM05D001607 ORTHO05D001893 4.3e-33 146.0 95 74.7
Cfa022709 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.5e-30 137.5 117 68.4
Cfa022711 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.5e-30 137.5 117 68.4
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 5.8e-30 135.6 183 41.5
QL09p013733 Quercus lobata HOM05D001607 ORTHO05D001893 3.3e-25 119.8 87 72.4
Lsat_1_v5_gn_5_182440 Lactuca sativa HOM05D001092 ORTHO05D000923 2.5e-17 93.6 73 65.8
GSVIVG01028926001 Vitis vinifera HOM05D001607 ORTHO05D001893 1.3e-16 91.3 54 75.9
Hma1.2p1_1380F.1_g279270 Hydrangea macrophylla HOM05D001607 ORTHO05D001893 1.9e-12 77.4 49 75.5
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 9.4e-12 75.1 50 68.0
arahy.Tifrunner.gnm1.ann1.C6CLGC Arachis hypogaea HOM05D001607 ORTHO05D001893 3.6e-11 73.2 57 68.4
EL10As6g23646 Beta vulgaris HOM05D019569 ORTHO05D021192 3.0e-10 70.1 61 63.9
Nitab4.5_0000980g0200 Nicotiana tabacum HOM05D001607 ORTHO05D016189 2.2e-08 63.9 69 43.5
vmacro06989 Vaccinium macrocarpon HOM05D006091 ORTHO05D006421 1.4e-07 61.2 146 35.6
Medtr1g101015 Medicago truncatula HOM05D001607 ORTHO05D001893 9.1e-07 58.5 57 54.4


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