Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG00G002380 Citrullus lanatus HOM05D008622 ORTHO05D010757 6.3e-70 267.3 135 100.0
MELO3C028501.2 Cucumis melo HOM05D008622 ORTHO05D010757 4.2e-13 78.6 52 71.2
Sed0001678 Sechium edule HOM05D008622 ORTHO05D010757 2.1e-12 76.3 36 94.4
Sed0011032 Sechium edule HOM05D008622 ORTHO05D010757 2.1e-12 76.3 36 94.4
Sed0018360 Sechium edule HOM05D008622 ORTHO05D010757 2.1e-12 76.3 36 94.4
Sed0025419 Sechium edule HOM05D008622 ORTHO05D010757 2.1e-12 76.3 36 94.4
Gohir.1Z050166 Gossypium hirsutum HOM05D008622 ORTHO05D010757 7.9e-12 74.3 36 94.4
Gohir.A12G078500 Gossypium hirsutum HOM05D008622 ORTHO05D010757 7.9e-12 74.3 36 94.4
Gorai.001G180700 Gossypium raimondii HOM05D008622 ORTHO05D010757 7.9e-12 74.3 36 94.4
LjContig00489g0025793 Lotus japonicus HOM05D008622 ORTHO05D010757 1.0e-11 73.9 36 94.4
Nn020s41492 Nelumbo nucifera HOM05D008622 ORTHO05D010757 1.0e-11 73.9 35 97.1
CiPaw.06G085000 Carya illinoinensis HOM05D008622 ORTHO05D010757 1.3e-11 73.6 37 91.9
CAN.G612.10 Capsicum annuum HOM05D008622 ORTHO05D010757 1.8e-11 73.2 35 97.1
CAN.G877.8 Capsicum annuum HOM05D008622 ORTHO05D010757 1.8e-11 73.2 35 97.1
Peaxi162Scf00110g00044 Petunia axillaris HOM05D008622 ORTHO05D010757 1.8e-11 73.2 35 97.1
DCAR_032466 Daucus carota HOM05D008622 ORTHO05D010757 3.9e-11 72.0 40 85.0
PSO548G0027 Papaver somniferum HOM05D008622 ORTHO05D010757 5.1e-11 71.6 35 94.3
Gohir.D08G095680 Gossypium hirsutum HOM05D008622 ORTHO05D010757 6.7e-11 71.2 36 91.7
PGR111G0016 Punica granatum HOM05D008622 ORTHO05D010757 6.7e-11 71.2 36 88.9
Cfa023043 Carpinus fangiana HOM05D011356 ORTHO05D013405 1.5e-10 70.1 52 73.1
Nitab4.5_0016174g0030 Nicotiana tabacum HOM05D001325 ORTHO05D001540 1.9e-10 69.7 35 91.4
Migut.H01168 Erythranthe guttata HOM05D008622 ORTHO05D010757 9.6e-10 67.4 35 85.7
HanXRQChr00c0496g0575161 Helianthus annuus HOM05D008622 ORTHO05D010757 1.3e-09 67.0 33 93.9
Glyma.16G088900 Glycine max HOM05D008622 ORTHO05D010757 1.6e-09 66.6 36 80.6
Gohir.D06G105260 Gossypium hirsutum HOM05D008622 ORTHO05D010757 1.6e-09 66.6 36 83.3
Aa31csc553G60 Aethionema arabicum HOM05D011356 ORTHO05D013405 2.1e-09 66.2 76 52.6
LjContig00318g0003846 Lotus japonicus HOM05D008622 ORTHO05D010757 2.1e-09 66.2 36 83.3
AL3G44330 Arabidopsis lyrata HOM05D011356 ORTHO05D013405 2.8e-09 65.9 81 49.4
Solyc02g011995.1 Solanum lycopersicum HOM05D008622 ORTHO05D010757 3.7e-09 65.5 35 88.6
C06p21400 Brassica napus HOM05D008622 ORTHO05D010757 8.2e-09 64.3 36 83.3
BolSC37t60776H Brassica oleracea HOM05D008622 ORTHO05D010757 8.2e-09 64.3 36 83.3
BolSC45t60930H Brassica oleracea HOM05D008622 ORTHO05D010757 8.2e-09 64.3 36 83.3
BraSC25t45888Z Brassica rapa HOM05D008622 ORTHO05D010757 8.2e-09 64.3 36 83.3
BraSC59t46518Z Brassica rapa HOM05D008622 ORTHO05D010757 8.2e-09 64.3 36 83.3
Gorai.012G044100 Gossypium raimondii HOM05D008622 ORTHO05D010757 8.2e-09 64.3 34 85.3
Nitab4.5_0004864g0050 Nicotiana tabacum HOM05D000540 ORTHO05D000681 1.1e-08 63.9 31 93.5
BcaC08g43708 Brassica carinata HOM05D011356 ORTHO05D013405 1.4e-08 63.5 81 48.1
Thhalv10028241m.g Eutrema salsugineum HOM05D008622 ORTHO05D010757 1.4e-08 63.5 36 83.3
CARHR281850 Cardamine hirsuta HOM05D008622 ORTHO05D010757 2.4e-08 62.8 36 80.6
CiPaw.01G059700 Carya illinoinensis HOM05D008622 ORTHO05D010757 6.9e-08 61.2 35 80.0
C06p01590 Brassica napus HOM05D011356 ORTHO05D013405 1.5e-07 60.1 38 78.9
ATCG00050 Arabidopsis thaliana HOM05D008622 ORTHO05D010757 5.8e-07 58.2 36 75.0
BolC6t35290H Brassica oleracea HOM05D011356 ORTHO05D013405 1.3e-06 57.0 38 76.3


User provided reference genes

Program Settings