Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033989m.g Citrus clementina HOM05D007549 ORTHO05D009532 1.5e-32 142.1 67 100.0
Nn021s41532 Nelumbo nucifera HOM05D007549 ORTHO05D009532 7.1e-30 133.3 67 91.0
AL2G21610 Arabidopsis lyrata HOM05D007549 ORTHO05D009532 4.6e-29 130.6 67 88.1
EL10As12g24029 Beta vulgaris HOM05D007549 ORTHO05D009532 4.6e-29 130.6 67 88.1
EL10As15g24130 Beta vulgaris HOM05D007549 ORTHO05D009532 4.6e-29 130.6 67 88.1
Gohir.1Z050480 Gossypium hirsutum HOM05D007549 ORTHO05D009532 6.0e-29 130.2 67 88.1
Gohir.A09G103600 Gossypium hirsutum HOM05D007549 ORTHO05D009532 6.0e-29 130.2 67 88.1
Gohir.D02G088100 Gossypium hirsutum HOM05D007549 ORTHO05D009532 6.0e-29 130.2 67 88.1
Sed0011532 Sechium edule HOM05D007549 ORTHO05D009532 1.7e-28 128.6 67 89.6
Sed0017373 Sechium edule HOM05D007549 ORTHO05D009532 1.7e-28 128.6 67 89.6
Sed0021629 Sechium edule HOM05D007549 ORTHO05D009532 1.7e-28 128.6 67 89.6
Sed0025178 Sechium edule HOM05D007549 ORTHO05D009532 1.7e-28 128.6 67 89.6
A06p23130 Brassica napus HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BNapus_Darmor_BZH_scaffold_253p00240 Brassica napus HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BNapus_Darmor_BZH_scaffold_287p00180 Brassica napus HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
C02p43570 Brassica napus HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
C06p22970 Brassica napus HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
C06p23020 Brassica napus HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BolC8t52432H Brassica oleracea HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BolSC29t60475H Brassica oleracea HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BolSC29t60596H Brassica oleracea HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BolSC35t60656H Brassica oleracea HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BolSC35t60741H Brassica oleracea HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BolSC47t61088H Brassica oleracea HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BraA06t25416Z Brassica rapa HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
BraSC25t45857Z Brassica rapa HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
CARHR282150 Cardamine hirsuta HOM05D007549 ORTHO05D009532 2.3e-28 128.3 67 86.6
PSO548G0033 Papaver somniferum HOM05D007549 ORTHO05D009532 3.0e-28 127.9 67 88.1
RcHm_v2.0_CPg0502021 Rosa chinensis HOM05D007549 ORTHO05D009532 3.9e-28 127.5 67 89.6
ATCG00640 Arabidopsis thaliana HOM05D007549 ORTHO05D009532 5.1e-28 127.1 67 85.1
Gohir.D12G108000 Gossypium hirsutum HOM05D007549 ORTHO05D009532 5.1e-28 127.1 67 86.6
BolC9t53163H Brassica oleracea HOM05D007549 ORTHO05D009532 8.7e-28 126.3 67 86.6
MELO3C001514.2 Cucumis melo HOM05D007549 ORTHO05D009532 8.7e-28 126.3 67 88.1
BolSC49t61174H Brassica oleracea HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 85.1
HanXRQChr00c0314g0573541 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr01g0020311 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr02g0041601 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr02g0044861 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr10g0284281 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr10g0289301 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr10g0318161 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr11g0326871 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQChr11g0345191 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
HanXRQCPg0580081 Helianthus annuus HOM05D007549 ORTHO05D009532 1.1e-27 125.9 67 83.6
DCAR_032505 Daucus carota HOM05D007549 ORTHO05D009532 1.5e-27 125.6 67 83.6
Solyc09g064410.1 Solanum lycopersicum HOM05D007549 ORTHO05D009532 1.5e-27 125.6 67 85.1
CsaV3_7G024610 Cucumis sativus L. HOM05D007549 ORTHO05D009532 1.9e-27 125.2 67 86.6
PGR111G0018 Punica granatum HOM05D007549 ORTHO05D009532 1.9e-27 125.2 69 87.0
CAN.G1148.11 Capsicum annuum HOM05D007549 ORTHO05D009532 2.5e-27 124.8 67 85.1
CAN.G1314.5 Capsicum annuum HOM05D007549 ORTHO05D009532 2.5e-27 124.8 67 85.1
CAN.G2018.15 Capsicum annuum HOM05D007549 ORTHO05D009532 2.5e-27 124.8 67 85.1
CAN.G2018.7 Capsicum annuum HOM05D007549 ORTHO05D009532 2.5e-27 124.8 67 85.1
CAN.G438.85 Capsicum annuum HOM05D007549 ORTHO05D009532 2.5e-27 124.8 67 85.1
Potri.003G067400 Populus trichocarpa HOM05D007549 ORTHO05D009532 2.5e-27 124.8 67 85.1
BolC2t08912H Brassica oleracea HOM05D007549 ORTHO05D009532 3.3e-27 124.4 67 85.1
BolC6t36197H Brassica oleracea HOM05D007549 ORTHO05D009532 3.3e-27 124.4 67 83.6
HanXRQChr04g0095131 Helianthus annuus HOM05D007549 ORTHO05D009532 3.3e-27 124.4 67 82.1
Gohir.A10G214800 Gossypium hirsutum HOM05D007549 ORTHO05D009532 4.3e-27 124.0 67 83.6
BraSC138t45567Z Brassica rapa HOM05D007549 ORTHO05D009532 7.3e-27 123.2 65 84.6
CAN.G3365.3 Capsicum annuum HOM05D007549 ORTHO05D009532 9.6e-27 122.9 67 82.1
Gohir.A06G124600 Gossypium hirsutum HOM05D007549 ORTHO05D009532 3.6e-26 120.9 67 82.1
HanXRQChr02g0052591 Helianthus annuus HOM05D007549 ORTHO05D009532 3.6e-26 120.9 67 80.6
CAN.G452.5 Capsicum annuum HOM05D007549 ORTHO05D009532 4.8e-26 120.6 67 83.6
BraSC58t46491Z Brassica rapa HOM05D007549 ORTHO05D009532 1.8e-25 118.6 62 85.5
ClCG11G009530 Citrullus lanatus HOM05D007549 ORTHO05D009532 1.8e-25 118.6 62 87.1
HanXRQChr00c0339g0573821 Helianthus annuus HOM05D007549 ORTHO05D009532 2.4e-25 118.2 62 82.3
HanXRQChr10g0283591 Helianthus annuus HOM05D007549 ORTHO05D009532 2.4e-25 118.2 62 82.3
Oeu062831.1 Olea europaea HOM05D007549 ORTHO05D009532 6.9e-25 116.7 67 82.1
Lalb_Chr07g0192081 Lupinus albus HOM05D007549 ORTHO05D009532 4.5e-24 114.0 68 80.9
Lalb_Chr20g0115511 Lupinus albus HOM05D007549 ORTHO05D009532 4.5e-24 114.0 68 80.9
Lj1g0000802 Lotus japonicus HOM05D007549 ORTHO05D009532 4.9e-23 110.5 67 77.6
LjContig00318g0016693 Lotus japonicus HOM05D007549 ORTHO05D009532 4.9e-23 110.5 67 77.6
Glyma.12G232300 Glycine max HOM05D007549 ORTHO05D009532 6.4e-23 110.2 67 77.6
Medtr4g051350 Medicago truncatula HOM05D004570 ORTHO05D009532 6.4e-23 110.2 61 78.7
Lj5g0014355 Lotus japonicus HOM05D007549 ORTHO05D009532 1.4e-22 109.0 67 76.1
Glyma.15G239000 Glycine max HOM05D007549 ORTHO05D009532 2.4e-22 108.2 67 74.6
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 3.2e-22 107.8 62 75.8
Gohir.D11G296624 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.2e-21 105.9 67 74.6
Gorai.007G320000 Gossypium raimondii HOM05D007549 ORTHO05D009532 1.2e-21 105.9 67 74.6
Lalb_Chr23g0274441 Lupinus albus HOM05D007549 ORTHO05D009532 6.0e-21 103.6 67 74.6
HanXRQChr11g0331601 Helianthus annuus HOM05D007549 ORTHO05D009532 7.9e-21 103.2 66 69.7
BolC4t25867H Brassica oleracea HOM05D007549 ORTHO05D009532 2.3e-20 101.7 56 80.4
ClCG02G007770 Citrullus lanatus HOM05D007549 ORTHO05D009532 5.1e-20 100.5 67 76.1
arahy.Tifrunner.gnm1.ann1.JD40MT Arachis hypogaea HOM05D007549 ORTHO05D009532 1.1e-19 99.4 59 76.3
HanXRQChr16g0529021 Helianthus annuus HOM05D007549 ORTHO05D009532 9.6e-19 96.3 47 91.5
Gohir.D07G173850 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.3e-18 95.9 67 67.2
Gorai.001G194300 Gossypium raimondii HOM05D007549 ORTHO05D009532 6.2e-18 93.6 67 65.7
HanXRQChr00c0557g0575791 Helianthus annuus HOM05D007549 ORTHO05D009532 2.6e-16 88.2 51 78.4
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 9.9e-16 86.3 67 62.7
TPR.G34467 Trifolium pratense HOM05D007549 ORTHO05D009532 2.9e-15 84.7 50 74.0
Gohir.D11G284350 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.9e-14 82.0 67 62.7
Lalb_Chr23g0274351 Lupinus albus HOM05D007549 ORTHO05D009532 2.4e-14 81.6 51 80.4
Hund31442 Selenicereus undatus HOM05D007549 ORTHO05D009532 5.5e-14 80.5 53 71.7
Gohir.D06G113650 Gossypium hirsutum HOM05D007549 ORTHO05D009532 9.3e-14 79.7 67 59.7
Gohir.A07G175856 Gossypium hirsutum HOM05D007549 ORTHO05D009532 1.0e-12 76.3 67 58.2
MCO12G297 Micromonas commoda HOM05D007549 ORTHO05D009532 1.5e-11 72.4 66 56.1
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 8.2e-10 66.6 38 84.2
PRCOL_00001223 Prasinoderma coloniale HOM05D007549 ORTHO05D009532 1.8e-09 65.5 66 53.0
BraSC58t46430Z Brassica rapa HOM05D007549 ORTHO05D009532 6.9e-09 63.5 37 78.4
Cre10.g462950 Chlamydomonas reinhardtii HOM05D007549 ORTHO05D009532 7.6e-08 60.1 65 50.8


User provided reference genes

Program Settings