Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.6e-49 199.1 104 100.0
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 7.4e-34 147.1 104 77.9
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 1.3e-33 146.4 103 77.7
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.6e-33 146.0 102 74.5
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 2.1e-33 145.6 102 76.5
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 2.1e-33 145.6 104 76.9
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 2.8e-33 145.2 103 77.7
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 3.7e-33 144.8 104 77.9
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 3.7e-33 144.8 104 75.0
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 1.8e-32 142.5 104 75.0
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.8e-32 142.5 104 75.0
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.8e-32 142.5 104 75.0
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 1.8e-32 142.5 104 74.0
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 3.1e-32 141.7 103 74.8
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 9.0e-32 140.2 104 74.0
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 9.0e-32 140.2 104 72.1
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-31 139.8 103 73.8
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-31 139.8 103 73.8
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 1.2e-31 139.8 101 74.3
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 2.0e-31 139.0 104 74.0
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.5e-31 137.9 104 73.1
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 4.5e-31 137.9 104 72.1
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 7.6e-31 137.1 104 72.1
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 1.3e-30 136.3 101 71.3
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.3e-30 136.3 104 72.1
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.9e-30 135.2 104 71.2
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 6.5e-30 134.0 104 68.3
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 1.1e-29 133.3 104 70.2
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 1.4e-29 132.9 104 72.1
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.9e-29 132.5 92 73.9
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 1.9e-29 132.5 104 69.2
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 2.5e-29 132.1 104 68.3
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 3.2e-29 131.7 104 67.3
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 3.2e-29 131.7 104 67.3
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 7.1e-29 130.6 104 67.3
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 7.1e-29 130.6 89 77.5
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 9.3e-29 130.2 100 67.0
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 9.3e-29 130.2 104 69.2
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 1.6e-28 129.4 104 67.3
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 3.5e-28 128.3 104 64.4
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 3.5e-28 128.3 104 69.2
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 4.6e-28 127.9 104 68.3
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 6.0e-28 127.5 128 60.9
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 7.9e-28 127.1 104 64.4
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 7.9e-28 127.1 104 66.3
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.0e-27 126.7 101 70.3
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 1.0e-27 126.7 104 65.4
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 1.3e-27 126.3 91 70.3
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 1.3e-27 126.3 103 66.0
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 1.3e-27 126.3 100 62.0
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 1.3e-27 126.3 97 68.0
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 1.8e-27 125.9 97 63.9
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 3.0e-27 125.2 104 66.3
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 3.9e-27 124.8 97 66.0
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 5.1e-27 124.4 97 67.0
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 6.7e-27 124.0 104 65.4
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 6.7e-27 124.0 104 65.4
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 8.7e-27 123.6 90 67.8
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 8.7e-27 123.6 104 65.4
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 1.5e-26 122.9 104 67.3
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 1.9e-26 122.5 93 71.0
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 3.3e-26 121.7 83 78.3
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 4.3e-26 121.3 96 63.5
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 7.4e-26 120.6 97 69.1
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 7.4e-26 120.6 104 64.4
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 9.6e-26 120.2 97 69.1
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 1.3e-25 119.8 104 64.4
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 2.8e-25 118.6 104 64.4
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 4.8e-25 117.9 94 66.0
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 6.2e-25 117.5 104 66.3
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 8.2e-25 117.1 102 58.8
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 1.1e-24 116.7 104 66.3
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.1e-24 116.7 92 66.3
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 3.1e-24 115.2 87 70.1
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 3.1e-24 115.2 93 62.4
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 9.0e-24 113.6 101 63.4
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 2.6e-23 112.1 99 66.7
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 2.6e-23 112.1 98 57.1
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 3.4e-23 111.7 98 57.1
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 5.8e-23 110.9 92 65.2
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 5.8e-23 110.9 92 62.0
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 5.8e-23 110.9 98 66.3
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 5.8e-23 110.9 98 66.3
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 5.8e-23 110.9 98 66.3
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 5.8e-23 110.9 98 66.3
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.0e-22 110.2 77 77.9
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 1.3e-22 109.8 98 60.2
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 2.5e-21 105.5 104 60.6
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 5.5e-21 104.4 102 61.8
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.2e-20 103.2 98 58.2
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 1.2e-20 103.2 80 68.8
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 3.5e-20 101.7 97 57.7
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.0e-19 100.1 93 59.1
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 6.7e-19 97.4 109 51.4
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 6.7e-19 97.4 100 55.0
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 6.7e-19 97.4 78 73.1
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 8.7e-19 97.1 93 52.7
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 1.5e-18 96.3 103 56.3
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.9e-18 95.9 100 54.0
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 4.3e-18 94.7 92 54.3
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 4.1e-16 88.2 87 55.2
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 5.3e-16 87.8 86 55.8
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 9.0e-16 87.0 65 64.6
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 5.9e-15 84.3 93 50.5
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-14 83.6 63 65.1
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.2e-14 82.4 56 76.8
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 2.3e-11 72.4 94 43.6
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 6.7e-11 70.9 56 69.6
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 6.9e-08 60.8 35 82.9
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 9.1e-08 60.5 79 50.6
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 3.8e-06 55.1 102 32.4


User provided reference genes

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