Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033795m.g Citrus clementina HOM05D015905 ORTHO05D014193 1.3e-82 309.7 160 100.0
Ciclev10033711m.g Citrus clementina HOM05D000045 ORTHO05D002701 4.3e-17 92.0 69 71.0
Atru.chr11.2441 Acer truncatum HOM05D000045 ORTHO05D002701 1.7e-13 80.1 75 49.3
Atru.chr2.3305 Acer truncatum HOM05D000045 ORTHO05D002701 1.7e-13 80.1 75 49.3
Prupe.6G116200 Prunus persica HOM05D000045 ORTHO05D002701 2.3e-10 69.7 69 50.7
Atru.chr7.967 Acer truncatum HOM05D000045 ORTHO05D000067 3.9e-10 68.9 62 50.0
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 5.1e-10 68.6 68 51.5
Prupe.7G015200 Prunus persica HOM05D021215 ORTHO05D002701 6.7e-10 68.2 56 51.8
PSO017G5661 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-09 67.4 80 47.5
Atru.chr1.1263 Acer truncatum HOM05D000045 ORTHO05D002701 1.5e-09 67.0 99 44.4
Prupe.2G013600 Prunus persica HOM05D000045 ORTHO05D000067 1.5e-09 67.0 88 42.0
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 1.5e-09 67.0 88 42.0
Atru.chr2.2016 Acer truncatum HOM05D000045 ORTHO05D000067 3.3e-09 65.9 110 40.0
PSO832G2963 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-08 63.9 78 41.0
PSO063G2828 Papaver somniferum HOM05D000045 ORTHO05D000067 2.2e-08 63.2 77 41.6
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 6.3e-08 61.6 76 39.5
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 6.3e-08 61.6 76 39.5
TWI38G2130 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.2e-08 61.2 87 40.2
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.1e-07 60.8 71 43.7
CSS0038184 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-07 60.5 91 38.5
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-07 60.5 100 38.0
Oeu063616.1 Olea europaea HOM05D015905 ORTHO05D014193 1.4e-07 60.5 76 42.1
PSO384G3943 Papaver somniferum HOM05D000045 ORTHO05D002701 1.8e-07 60.1 75 45.3
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.4e-07 59.7 81 38.3
Potri.006G039800 Populus trichocarpa HOM05D001299 ORTHO05D013156 2.4e-07 59.7 67 43.3
vmacro16255 Vaccinium macrocarpon HOM05D000045 ORTHO05D002701 2.4e-07 59.7 75 44.0
CiPaw.05G224800 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.1e-07 59.3 90 37.8
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.1e-07 59.3 60 45.0
PSO063G4975 Papaver somniferum HOM05D000160 ORTHO05D011801 3.1e-07 59.3 69 47.8
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 3.1e-07 59.3 67 43.3
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 3.1e-07 59.3 67 43.3
vmacro20975 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 3.1e-07 59.3 70 45.7
Aqoxy3G02402 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 4.1e-07 58.9 70 38.6
vmacro19402 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 5.3e-07 58.5 88 38.6
CSS0026078 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D002701 6.9e-07 58.2 104 38.5
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.0e-07 57.8 99 33.3
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-06 57.4 88 37.5
PSO339G4486 Papaver somniferum HOM05D000045 ORTHO05D002701 1.2e-06 57.4 50 56.0
SGA_v2.0_scaffold109G31025 Striga asiatica HOM05D000045 ORTHO05D002701 1.2e-06 57.4 81 40.7
FvH4_2g24401 Fragaria vesca HOM05D000045 ORTHO05D000067 2.0e-06 56.6 79 40.5
TWI60G1535 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.4e-06 55.8 84 34.5
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 3.4e-06 55.8 74 40.5
SGA_v2.0_scaffold18G08264 Striga asiatica HOM05D000045 ORTHO05D009940 4.5e-06 55.5 80 41.2
CSS0010592 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.9e-06 55.1 77 36.4
CiPaw.07G176900 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.9e-06 55.1 53 45.3
TWI09G1457 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.9e-06 55.1 83 36.1
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.9e-06 55.1 126 31.7
PSO017G1702 Papaver somniferum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 70 41.4
PSO063G5377 Papaver somniferum HOM05D000045 ORTHO05D000067 7.7e-06 54.7 70 41.4
CiPaw.09G162400 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.0e-05 54.3 77 36.4
CiPaw.09G196800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.0e-05 54.3 53 43.4


User provided reference genes

Program Settings