Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033509m.g Citrus clementina HOM05D009020 ORTHO05D010722 1.1e-98 363.2 180 100.0
Cfa007825 Carpinus fangiana HOM05D009020 ORTHO05D010722 1.0e-30 137.5 156 51.3
Potri.018G102900 Populus trichocarpa HOM05D009020 ORTHO05D010722 4.0e-27 125.6 158 43.0
QL02p057804 Quercus lobata HOM05D009020 ORTHO05D010722 5.7e-26 121.7 145 46.9
Prupe.2G246500 Prunus persica HOM05D009020 ORTHO05D010722 1.7e-25 120.2 139 48.9
Lj1g0016360 Lotus japonicus HOM05D009020 ORTHO05D010722 2.2e-25 119.8 156 46.2
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 8.3e-25 117.9 138 46.4
Haze_14243 Corylus avellana HOM05D009020 ORTHO05D010722 1.1e-24 117.5 138 47.8
Haze_14246 Corylus avellana HOM05D009020 ORTHO05D010722 1.1e-24 117.5 138 47.8
Potri.006G180700 Populus trichocarpa HOM05D009020 ORTHO05D010722 1.4e-24 117.1 138 44.9
Sabra18G0088500 Salix brachista HOM05D009020 ORTHO05D010722 1.3e-22 110.5 187 38.0
Dinv20958 Davidia involucrata HOM05D002301 ORTHO05D002316 4.7e-20 102.1 156 39.1
Dinv20985 Davidia involucrata HOM05D002301 ORTHO05D002316 4.7e-20 102.1 156 39.1
Atru.chr12.238 Acer truncatum HOM05D009020 ORTHO05D010722 6.1e-20 101.7 143 42.0
Lalb_Chr07g0188651 Lupinus albus HOM05D009020 ORTHO05D010722 8.0e-20 101.3 135 43.0
Lalb_Chr07g0188631 Lupinus albus HOM05D009020 ORTHO05D010722 1.4e-19 100.5 111 47.7
Manes.14G113400 Manihot esculenta HOM05D009020 ORTHO05D010722 8.9e-19 97.8 153 37.9
TPR.G16305 Trifolium pratense HOM05D009020 ORTHO05D010722 2.0e-18 96.7 138 36.2
arahy.Tifrunner.gnm1.ann1.TW3CAC Arachis hypogaea HOM05D009020 ORTHO05D010722 3.4e-18 95.9 135 41.5
arahy.Tifrunner.gnm1.ann1.V1A3WV Arachis hypogaea HOM05D009020 ORTHO05D010722 3.4e-18 95.9 135 41.5
Medtr3g070160 Medicago truncatula HOM05D009020 ORTHO05D010722 9.8e-18 94.4 152 37.5
Manes.10G017300 Manihot esculenta HOM05D009020 ORTHO05D010722 2.2e-17 93.2 133 42.9
Lalb_Chr15g0084281 Lupinus albus HOM05D009020 ORTHO05D010722 6.4e-17 91.7 116 42.2
Psat5g127160 Pisum sativum HOM05D009020 ORTHO05D010722 1.1e-16 90.9 163 36.8
Gohir.D08G235401 Gossypium hirsutum HOM05D021924 ORTHO05D010722 3.2e-16 89.4 156 34.0
Gorai.004G250000 Gossypium raimondii HOM05D021924 ORTHO05D010722 3.2e-16 89.4 156 34.0
TAR299G0004 Trochodendron aralioides HOM05D009020 ORTHO05D010722 9.2e-16 87.8 138 37.0
Thecc.10G025900 Theobroma cacao HOM05D021924 ORTHO05D010722 2.0e-15 86.7 136 36.0
Gohir.A08G218200 Gossypium hirsutum HOM05D021924 ORTHO05D010722 1.0e-14 84.3 156 32.7
TAR299G0002 Trochodendron aralioides HOM05D009020 ORTHO05D010722 2.3e-14 83.2 137 36.5
TWI15G0239 Tripterygium wilfordii HOM05D009020 ORTHO05D010722 5.0e-14 82.0 81 49.4
TAR369G0652 Trochodendron aralioides HOM05D009020 ORTHO05D010722 1.9e-13 80.1 135 34.8
COL.COLO4_25656 Corchorus olitorius HOM05D021924 ORTHO05D010722 2.5e-13 79.7 140 34.3
FvH4_6g44890 Fragaria vesca HOM05D017350 ORTHO05D010722 2.1e-12 76.6 198 30.8
FAN14G0639 Fragaria x ananassa HOM05D017350 ORTHO05D010722 2.1e-12 76.6 198 30.8
Medtr2g021200 Medicago truncatula HOM05D009020 ORTHO05D010722 4.0e-11 72.4 116 38.8
FAN05G2309 Fragaria x ananassa HOM05D017350 ORTHO05D010722 6.8e-11 71.6 197 29.9
FAN02G2789 Fragaria x ananassa HOM05D017350 ORTHO05D010722 8.9e-11 71.2 198 29.8
Actinidia29679 Actinidia chinensis HOM05D009020 ORTHO05D010722 1.7e-09 67.0 153 30.7
THA.LOC104810075 Tarenaya hassleriana HOM05D009750 ORTHO05D011861 3.7e-09 65.9 111 35.1
FvH4_7g24041 Fragaria vesca HOM05D026061 ORTHO05D029373 2.4e-08 63.2 160 35.6
FvH4_7g24042 Fragaria vesca HOM05D026061 ORTHO05D029373 1.2e-07 60.8 116 32.8
FAN06G2432 Fragaria x ananassa HOM05D026061 ORTHO05D029373 1.2e-07 60.8 116 32.8
TAR369G0756 Trochodendron aralioides HOM05D009020 ORTHO05D010722 2.7e-07 59.7 107 33.6
FAN01G3032 Fragaria x ananassa HOM05D026061 ORTHO05D029373 6.6e-06 55.1 99 34.3
Peaxi162Scf00951g00037 Petunia axillaris HOM05D014753 ORTHO05D016888 6.6e-06 55.1 108 33.3


User provided reference genes

Program Settings