Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 6.8e-134 480.7 251 100.0
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 3.3e-64 249.2 223 62.8
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 7.4e-64 248.1 224 61.2
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 1.3e-63 247.3 238 57.1
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.8e-63 246.1 224 60.7
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 8.2e-63 244.6 237 59.1
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 1.1e-62 244.2 224 60.7
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.1e-62 244.2 242 57.9
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 5.3e-62 241.9 225 60.4
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 9.0e-62 241.1 241 55.6
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 9.0e-62 241.1 221 59.7
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 3.4e-61 239.2 224 61.2
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 2.2e-60 236.5 241 54.8
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 2.9e-60 236.1 232 56.5
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.9e-59 233.4 228 56.6
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 9.4e-59 231.1 233 55.8
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 6.1e-58 228.4 223 57.8
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.0e-57 227.6 228 55.3
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 4.3e-56 222.2 230 53.9
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 5.7e-56 221.9 251 52.2
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.7e-55 220.3 221 53.8
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 2.2e-55 219.9 224 52.7
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 4.8e-55 218.8 238 52.5
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 5.3e-54 215.3 222 53.2
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.2e-53 214.2 225 54.2
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 2.6e-53 213.0 248 51.2
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 3.4e-53 212.6 238 49.2
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.3e-52 210.7 224 55.8
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 1.7e-52 210.3 221 52.0
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 2.9e-52 209.5 230 52.2
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 3.8e-52 209.1 221 53.4
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 1.6e-50 203.8 223 52.0
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 6.1e-50 201.8 227 49.8
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 1.8e-49 200.3 236 50.4
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 5.1e-49 198.7 198 53.0
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 8.8e-49 198.0 199 52.3
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 1.5e-48 197.2 236 48.7
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 4.4e-48 195.7 227 50.2
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 4.4e-48 195.7 226 49.6
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 4.4e-48 195.7 221 50.2
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 7.4e-48 194.9 225 49.3
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 2.2e-47 193.4 223 49.8
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.2e-47 193.4 224 48.7
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 2.2e-47 193.4 223 49.8
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 2.8e-47 193.0 224 48.7
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 2.8e-47 193.0 225 49.8
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 4.8e-47 192.2 214 50.0
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 1.1e-46 191.0 225 49.8
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 7.0e-46 188.3 209 48.8
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 3.5e-45 186.0 247 48.2
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 4.5e-45 185.7 247 48.2
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 4.2e-43 179.1 144 62.5
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 7.2e-43 178.3 185 53.5
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 9.4e-43 177.9 247 47.4
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 2.6e-40 169.9 166 56.6
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 9.7e-40 167.9 227 43.2
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 2.0e-37 160.2 213 40.8
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 3.5e-37 159.5 232 43.1
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 3.5e-37 159.5 171 49.7
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 2.7e-34 149.8 179 44.1
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 1.0e-33 147.9 184 46.7
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 4.1e-30 136.0 169 50.9
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.6e-29 134.0 118 55.9
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 7.2e-27 125.2 244 34.0
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 1.0e-25 121.3 104 60.6
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.5e-21 106.3 186 34.4
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 2.3e-20 103.6 113 49.6
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 6.6e-20 102.1 181 34.8
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 5.6e-19 99.0 209 31.6
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.2e-18 97.8 206 31.6
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 6.1e-18 95.5 159 36.5
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 6.4e-15 85.5 65 67.7
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 8.3e-15 85.1 108 49.1
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.8e-14 84.0 190 32.6
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 4.1e-14 82.8 68 61.8
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 4.6e-13 79.3 119 37.0
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.9e-11 73.9 121 35.5
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 4.0e-09 66.2 53 64.2
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 3.4e-08 63.2 119 38.7


User provided reference genes

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