Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033478m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.7e-123 445.3 218 100.0
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.1e-92 343.6 277 67.5
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.1e-86 322.8 245 71.8
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.9e-77 292.0 252 64.3
Ciclev10013561m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.4e-58 229.6 224 59.4
Ciclev10013577m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.5e-57 225.3 154 77.3
Ciclev10013481m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.8e-57 224.9 221 57.9
Ciclev10033833m.g Citrus clementina HOM05D003171 ORTHO05D000921 8.1e-51 204.5 162 68.5
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 5.3e-42 175.3 275 37.1
Ciclev10017608m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.5e-39 166.4 152 59.9
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 2.5e-39 166.4 214 43.9
Ciclev10013525m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.0e-37 161.0 127 69.3
Ciclev10033396m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.0e-37 159.5 87 90.8
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.5e-36 157.1 279 36.2
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.3e-35 154.1 219 40.2
Ciclev10028952m.g Citrus clementina HOM05D003171 ORTHO05D000921 6.3e-35 151.8 279 34.1
Ciclev10033416m.g Citrus clementina HOM05D003171 ORTHO05D000921 9.1e-34 147.9 155 56.8
Ciclev10017745m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.7e-33 144.8 154 53.9
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.2e-32 143.3 263 33.5
FAN22G1922 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.4e-29 134.0 171 42.7
Atru.chr6.630 Acer truncatum HOM05D003171 ORTHO05D000921 3.3e-28 129.4 281 33.8
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 6.9e-26 121.7 175 42.9
Atru.chr2.1871 Acer truncatum HOM05D001008 ORTHO05D003293 1.5e-25 120.6 279 33.7
FAN23G0960 Fragaria x ananassa HOM05D003171 ORTHO05D000921 8.5e-24 114.8 164 39.0
FAN03G0665 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.6e-22 110.5 130 46.9
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 2.1e-22 110.2 149 42.3
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 3.6e-22 109.4 120 46.7
Prupe.8G117400 Prunus persica HOM05D003171 ORTHO05D000921 3.0e-21 106.3 201 36.8
Atru.chr10.354 Acer truncatum HOM05D028950 ORTHO05D000921 7.4e-20 101.7 156 40.4
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 7.4e-20 101.7 145 40.0
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.7e-19 100.5 211 35.1
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 3.7e-19 99.4 210 34.8
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 3.7e-19 99.4 210 34.8
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 8.2e-19 98.2 247 30.8
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 2.4e-18 96.7 267 28.1
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.4e-18 96.7 223 31.8
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-17 93.6 210 31.4
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 5.9e-17 92.0 204 32.4
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 7.7e-17 91.7 215 28.4
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 6.5e-16 88.6 231 28.6
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 8.5e-16 88.2 80 53.8
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 1.5e-15 87.4 189 33.9
Prupe.2G102600 Prunus persica HOM05D003171 ORTHO05D000921 2.5e-15 86.7 146 37.0
Dinv10828 Davidia involucrata HOM05D008473 ORTHO05D000921 2.1e-14 83.6 153 34.0
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.1e-14 83.6 167 32.9
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.1e-14 83.6 206 29.6
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 4.7e-14 82.4 302 25.5
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.7e-14 82.4 210 32.9
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 6.1e-14 82.0 164 32.3
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 6.1e-14 82.0 200 30.0
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 1.0e-13 81.3 229 29.7
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-13 81.3 200 30.0
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 1.0e-13 81.3 200 30.0
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.0e-13 81.3 167 32.9
Dinv10275 Davidia involucrata HOM05D008473 ORTHO05D000921 1.4e-13 80.9 169 32.5
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 1.4e-13 80.9 200 29.5
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 1.4e-13 80.9 200 29.5
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 3.0e-13 79.7 192 31.2
Ciclev10033776m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.2e-13 79.0 96 47.9
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 5.2e-13 79.0 200 30.0
Atru.chr4.1632 Acer truncatum HOM05D003171 ORTHO05D000921 6.7e-13 78.6 129 35.7
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 8.8e-13 78.2 200 29.5
Lj6g0011077 Lotus japonicus HOM05D003171 ORTHO05D000921 1.2e-12 77.8 185 31.9
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 1.2e-12 77.8 205 28.8
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-12 77.0 98 41.8
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 2.6e-12 76.6 172 32.6
FAN26G0494 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.6e-12 76.6 74 52.7
CANSAT35G0983 Cannabis sativa HOM05D003171 ORTHO05D000921 4.4e-12 75.9 70 48.6
Ciclev10024100m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.7e-12 75.5 96 44.8
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 5.7e-12 75.5 111 36.0
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 7.5e-12 75.1 171 32.7
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 9.7e-12 74.7 196 31.1
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 1.7e-11 73.9 252 25.4
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 1.7e-11 73.9 183 28.4
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 2.2e-11 73.6 187 29.4
COL.COLO4_34139 Corchorus olitorius HOM05D003171 ORTHO05D000921 2.8e-11 73.2 172 29.7
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 2.8e-11 73.2 132 35.6
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.7e-11 72.8 214 29.4
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 3.7e-11 72.8 171 31.0
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 4.8e-11 72.4 210 28.1
CSS0038075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.4e-10 70.1 203 28.1
Oeu050871.1 Olea europaea HOM05D003171 ORTHO05D000921 2.4e-10 70.1 70 45.7
Lsat_1_v5_gn_5_73681 Lactuca sativa HOM05D003171 ORTHO05D000921 4.1e-10 69.3 210 27.6
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 9.1e-10 68.2 172 27.9
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 9.1e-10 68.2 161 27.3
Oeu000369.1 Olea europaea HOM05D003171 ORTHO05D000921 9.1e-10 68.2 180 28.9
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.6e-09 67.4 215 28.8
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 1.6e-09 67.4 215 28.8
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 2.7e-09 66.6 210 28.1
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 7.7e-09 65.1 194 26.3
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 7.7e-09 65.1 239 24.3
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 1.0e-08 64.7 88 40.9
Cfa007688 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.7e-08 63.9 182 28.0
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 1.7e-08 63.9 173 28.3
TWI74G1594 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 1.7e-08 63.9 171 29.2
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 2.2e-08 63.5 227 28.6
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 2.2e-08 63.5 227 28.6
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 3.8e-08 62.8 172 26.7
Ciclev10013716m.g Citrus clementina HOM05D003171 ORTHO05D000921 6.5e-08 62.0 87 41.4
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 6.5e-08 62.0 227 28.2
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.5e-08 61.6 138 27.5
COL.COLO4_13994 Corchorus olitorius HOM05D008473 ORTHO05D016003 1.1e-07 61.2 131 31.3
ECA246G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-07 60.8 173 28.9
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 1.9e-07 60.5 218 26.6
Oeu041025.1 Olea europaea HOM05D000254 ORTHO05D000921 2.5e-07 60.1 57 47.4
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.2e-07 59.7 200 25.5
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 3.2e-07 59.7 202 27.7
COL.COLO4_15868 Corchorus olitorius HOM05D003171 ORTHO05D000921 4.2e-07 59.3 227 23.8
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 5.5e-07 58.9 188 28.7
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.2e-07 58.5 223 27.8
Lj1A366G18 Lonicera japonica HOM05D008338 ORTHO05D000921 7.2e-07 58.5 197 24.9
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 7.2e-07 58.5 188 28.7
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 9.4e-07 58.2 201 26.9
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 9.4e-07 58.2 188 28.7
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 9.4e-07 58.2 198 27.8
PGR042G3316 Punica granatum HOM05D003171 ORTHO05D000921 1.2e-06 57.8 191 28.3
PGR083G2390 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-06 57.4 165 25.5
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 2.1e-06 57.0 208 26.4
Lj7A99T40 Lonicera japonica HOM05D008338 ORTHO05D000921 2.1e-06 57.0 197 24.4
Lju1319C4G9 Lonicera japonica HOM05D008338 ORTHO05D000921 2.1e-06 57.0 197 24.4
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-06 57.0 220 25.0
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.7e-06 56.6 231 23.4
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.7e-06 56.6 220 25.0
PGR031G3942 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-06 56.6 166 25.3
PGR083G0806 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-06 56.6 166 25.3
PGR142G1110 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-06 56.6 166 25.3
PGR142G2502 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-06 56.6 166 25.3
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.6e-06 56.2 225 24.9
QL06p025400 Quercus lobata HOM05D003171 ORTHO05D000921 3.6e-06 56.2 155 28.4
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 4.7e-06 55.8 216 26.4
PGR102G1426 Punica granatum HOM05D003171 ORTHO05D000921 4.7e-06 55.8 166 25.3
Dinv06146 Davidia involucrata HOM05D003171 ORTHO05D000921 6.1e-06 55.5 81 40.7
PGR031G0230 Punica granatum HOM05D003171 ORTHO05D000921 6.1e-06 55.5 184 27.7
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 6.1e-06 55.5 132 28.0
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 6.1e-06 55.5 188 28.2
PGR102G1332 Punica granatum HOM05D003171 ORTHO05D000921 6.1e-06 55.5 166 24.7
Ciclev10010474m.g Citrus clementina HOM05D003171 ORTHO05D000921 8.0e-06 55.1 233 22.7
PGR083G2107 Punica granatum HOM05D003171 ORTHO05D000921 8.0e-06 55.1 155 26.5
PGR102G2917 Punica granatum HOM05D003171 ORTHO05D000921 8.0e-06 55.1 155 26.5
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 8.0e-06 55.1 192 26.6
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 8.0e-06 55.1 184 26.6


User provided reference genes

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