Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 5.1e-86 321.2 187 100.0
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.2e-29 134.0 182 45.6
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 1.1e-24 117.5 172 44.8
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 8.1e-23 111.3 164 44.5
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.4e-22 110.5 165 44.8
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 2.3e-22 109.8 178 43.3
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 8.9e-22 107.8 161 42.2
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 1.2e-21 107.5 183 43.7
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 1.7e-20 103.6 181 43.1
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.2e-20 103.2 169 43.8
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 3.7e-20 102.4 150 42.7
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 3.7e-20 102.4 169 44.4
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 3.7e-20 102.4 169 44.4
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 6.4e-20 101.7 180 40.6
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.1e-19 100.9 157 42.0
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 1.1e-19 100.9 149 43.0
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 5.4e-19 98.6 129 47.3
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 9.2e-19 97.8 169 43.2
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 9.2e-19 97.8 157 40.8
QL04p041480 Quercus lobata HOM05D008140 ORTHO05D009650 9.2e-19 97.8 174 40.2
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 1.2e-18 97.4 157 43.9
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 1.2e-18 97.4 187 41.7
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 1.6e-18 97.1 106 49.1
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.6e-18 97.1 169 42.0
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 3.5e-18 95.9 187 41.7
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 3.5e-18 95.9 103 50.5
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 1.7e-17 93.6 167 38.9
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 1.6e-15 87.0 117 46.2
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 2.8e-15 86.3 120 42.5
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 3.6e-15 85.9 102 51.0
QL04p041665 Quercus lobata HOM05D008140 ORTHO05D009650 8.1e-15 84.7 138 40.6
TAR636G0417 Trochodendron aralioides HOM05D008140 ORTHO05D009650 8.1e-15 84.7 116 45.7
Cfa011235 Carpinus fangiana HOM05D008140 ORTHO05D009650 4.0e-14 82.4 96 46.9
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 5.2e-14 82.0 117 43.6
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.0e-13 80.1 128 43.0
CARHR133500 Cardamine hirsuta HOM05D008140 ORTHO05D009650 3.4e-13 79.3 178 36.0
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 4.4e-13 79.0 161 37.9
A03p21600 Brassica napus HOM05D008140 ORTHO05D009650 5.8e-13 78.6 181 39.2
BraA03t11396Z Brassica rapa HOM05D008140 ORTHO05D009650 5.8e-13 78.6 181 39.2
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.9e-12 76.3 100 45.0
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 4.9e-12 75.5 95 46.3
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 6.4e-12 75.1 143 37.1
AL4G36090 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 1.1e-11 74.3 179 35.8
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 1.4e-11 73.9 103 42.7
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 2.4e-11 73.2 106 42.5
AT2G38790 Arabidopsis thaliana HOM05D008140 ORTHO05D009650 3.2e-11 72.8 178 36.5
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 3.2e-11 72.8 105 41.9
THA.LOC104803169 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 4.1e-11 72.4 174 33.9
Carub.0004s2081 Capsella rubella HOM05D008140 ORTHO05D009650 5.4e-11 72.0 187 36.9
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 5.4e-11 72.0 95 45.3
CiPaw.13G036900 Carya illinoinensis HOM05D008140 ORTHO05D009650 9.2e-11 71.2 151 31.1
CiPaw.13G036700 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.2e-10 70.9 114 41.2
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 1.2e-10 70.9 106 43.4
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 1.6e-10 70.5 124 37.9
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 2.1e-10 70.1 124 39.5
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 6.0e-10 68.6 95 45.3
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 7.8e-10 68.2 115 40.0
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.3e-09 67.4 119 40.3
BolC4t22473H Brassica oleracea HOM05D008140 ORTHO05D009650 2.3e-09 66.6 161 35.4
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 5.1e-09 65.5 80 45.0
BcaC02g12023 Brassica carinata HOM05D008140 ORTHO05D009650 8.6e-09 64.7 159 35.2
C04p08800 Brassica napus HOM05D008140 ORTHO05D009650 1.1e-08 64.3 159 35.2
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.1e-08 64.3 116 41.4
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 1.5e-08 63.9 96 38.5
A05p07360 Brassica napus HOM05D008140 ORTHO05D009650 2.5e-08 63.2 159 34.6
BraA05t19701Z Brassica rapa HOM05D008140 ORTHO05D009650 2.5e-08 63.2 159 34.6
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.5e-08 63.2 96 36.5
A05p07380 Brassica napus HOM05D008140 ORTHO05D009650 5.6e-08 62.0 159 34.6
BraA05t19703Z Brassica rapa HOM05D008140 ORTHO05D009650 5.6e-08 62.0 159 34.6
C03p25590 Brassica napus HOM05D008140 ORTHO05D009650 9.6e-08 61.2 179 35.2
BolC3t14947H Brassica oleracea HOM05D008140 ORTHO05D009650 9.6e-08 61.2 179 35.2
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.2e-07 60.8 122 40.2
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 2.8e-07 59.7 108 39.8
BcaB02g09155 Brassica carinata HOM05D008140 ORTHO05D009650 4.7e-07 58.9 159 33.3
BcaB02g09156 Brassica carinata HOM05D008140 ORTHO05D009650 4.7e-07 58.9 159 33.3
CiPaw.14G029100 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.8e-06 57.0 169 32.0
Cpa.g.sc19.24 Carica papaya HOM05D008140 ORTHO05D009650 4.0e-06 55.8 103 37.9
CANSAT56G1901 Cannabis sativa HOM05D008140 ORTHO05D009650 6.8e-06 55.1 163 38.7


User provided reference genes

Program Settings