Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 1.4e-53 212.6 103 100.0
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 8.6e-35 150.2 103 72.8
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 9.5e-34 146.7 103 69.9
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.6e-33 146.0 103 74.8
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 1.1e-32 143.3 103 68.9
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 8.9e-32 140.2 103 66.0
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.6e-31 138.7 103 68.0
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 3.4e-31 138.3 103 68.9
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 3.4e-31 138.3 103 70.9
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.4e-31 138.3 103 70.9
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.4e-31 138.3 103 70.9
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.4e-31 138.3 103 70.9
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 3.4e-31 138.3 103 70.9
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 4.4e-31 137.9 104 70.2
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 5.8e-31 137.5 103 69.9
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 7.5e-31 137.1 103 71.8
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 7.5e-31 137.1 103 71.8
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 7.5e-31 137.1 103 71.8
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 9.9e-31 136.7 105 67.6
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 1.3e-30 136.3 103 67.0
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 1.7e-30 136.0 104 70.2
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 1.7e-30 136.0 104 71.2
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.7e-30 136.0 104 67.3
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 3.7e-30 134.8 103 69.9
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 3.7e-30 134.8 103 69.9
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.7e-30 134.8 103 67.0
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 4.9e-30 134.4 103 68.0
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 4.9e-30 134.4 103 66.0
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 4.9e-30 134.4 107 67.3
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 6.4e-30 134.0 104 68.3
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 8.3e-30 133.7 103 68.9
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 8.3e-30 133.7 108 64.8
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 8.3e-30 133.7 104 64.4
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 8.3e-30 133.7 103 67.0
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 1.1e-29 133.3 106 66.0
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.1e-29 133.3 103 68.0
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.1e-29 133.3 105 66.7
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 1.1e-29 133.3 112 63.4
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.4e-29 132.9 103 68.9
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.4e-29 132.9 103 66.0
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.9e-29 132.5 103 68.9
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.9e-29 132.5 103 68.9
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.9e-29 132.5 105 64.8
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 2.4e-29 132.1 103 66.0
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 3.2e-29 131.7 103 67.0
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 4.1e-29 131.3 111 64.9
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 4.1e-29 131.3 107 65.4
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 4.1e-29 131.3 110 61.8
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 5.4e-29 131.0 111 63.1
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 5.4e-29 131.0 103 66.0
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 7.1e-29 130.6 105 65.7
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 7.1e-29 130.6 105 65.7
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 7.1e-29 130.6 111 62.2
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 7.1e-29 130.6 111 63.1
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 7.1e-29 130.6 110 60.9
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 7.1e-29 130.6 110 60.9
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 9.2e-29 130.2 103 66.0
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 9.2e-29 130.2 100 66.0
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 9.2e-29 130.2 106 67.0
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 65.0
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 62.1
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 1.2e-28 129.8 110 60.9
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.6e-28 129.4 111 62.2
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 2.7e-28 128.6 102 65.7
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 4.6e-28 127.9 103 62.1
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 4.6e-28 127.9 111 60.4
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 4.6e-28 127.9 105 63.8
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 6.0e-28 127.5 105 62.9
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 7.8e-28 127.1 107 64.5
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 7.8e-28 127.1 105 63.8
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.0e-27 126.7 107 62.6
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.0e-27 126.7 107 62.6
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.0e-27 126.7 107 62.6
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 1.3e-27 126.3 103 62.1
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.3e-27 126.3 108 63.0
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.7e-27 125.9 105 63.8
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 1.7e-27 125.9 106 60.4
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.7e-27 125.9 110 60.0
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 3.0e-27 125.2 109 59.6
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 3.9e-27 124.8 105 60.0
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 3.9e-27 124.8 105 60.0
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.9e-27 124.8 104 62.5
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 5.1e-27 124.4 105 64.8
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.1e-27 124.4 106 60.4
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 5.1e-27 124.4 107 63.6
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 6.6e-27 124.0 104 63.5
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.1e-26 123.2 106 62.3
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 3.3e-26 121.7 109 61.5
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 59.2
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 4.3e-26 121.3 99 63.6
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 4.3e-26 121.3 67 88.1
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 7.3e-26 120.6 108 60.2
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 7.3e-26 120.6 99 63.6
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 7.3e-26 120.6 103 62.1
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 9.5e-26 120.2 104 58.7
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 2.1e-25 119.0 104 62.5
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 2.1e-25 119.0 103 61.2
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 2.8e-25 118.6 100 61.0
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 3.6e-25 118.2 78 76.9
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 4.7e-25 117.9 104 61.5
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 6.2e-25 117.5 63 87.3
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 8.1e-25 117.1 94 63.8
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.1e-24 116.7 104 62.5
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 1.4e-24 116.3 107 63.6
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 1.4e-24 116.3 106 57.5
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 8.9e-24 113.6 69 79.7
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.5e-23 112.8 105 58.1
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 2.6e-23 112.1 75 73.3
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.3e-22 109.8 104 57.7
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 2.9e-22 108.6 85 67.1
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.8e-22 108.2 67 77.6
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.1e-21 106.7 108 52.8
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 1.2e-20 103.2 103 56.3
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 2.1e-20 102.4 62 75.8
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 4.6e-20 101.3 105 53.3
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 7.3e-18 94.0 103 52.4
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 4.0e-16 88.2 74 62.2
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 4.4e-15 84.7 55 63.6
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 7.6e-15 84.0 98 51.0
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 9.9e-15 83.6 78 51.3
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 1.1e-13 80.1 55 69.1
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.4e-13 79.7 71 56.3
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 1.4e-13 79.7 92 47.8
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 2.1e-12 75.9 55 58.2
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 7.8e-12 73.9 92 51.1
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 9.6e-10 67.0 32 87.5
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 2.8e-09 65.5 67 50.7
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.6e-09 65.1 132 34.1


User provided reference genes

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