Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033060m.g Citrus clementina HOM05D007120 ORTHO05D008881 7.4e-63 243.8 133 100.0
COL.COLO4_19468 Corchorus olitorius HOM05D007120 ORTHO05D008881 1.9e-10 69.7 47 70.2
Aa31LG3G1380 Aethionema arabicum HOM05D007120 ORTHO05D008881 4.7e-09 65.1 50 64.0
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 4.7e-09 65.1 45 71.1
Gohir.A06G180100 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.0e-08 63.9 45 68.9
Gohir.D06G187000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.0e-08 63.9 45 68.9
Gorai.010G219300 Gossypium raimondii HOM05D007120 ORTHO05D008881 1.0e-08 63.9 45 68.9
Gorai.013G008400 Gossypium raimondii HOM05D007120 ORTHO05D008881 5.2e-08 61.6 45 66.7
Gohir.D13G008000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 1.2e-07 60.5 45 64.4
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 1.2e-07 60.5 45 62.2
RcHm_v2.0_Chr1g0372461 Rosa chinensis HOM05D007120 ORTHO05D008881 1.2e-07 60.5 45 64.4
CsaV3_6G002350 Cucumis sativus L. HOM05D007120 ORTHO05D008881 2.6e-07 59.3 46 63.0
RcHm_v2.0_Chr7g0235281 Rosa chinensis HOM05D007120 ORTHO05D008881 2.6e-07 59.3 45 62.2
RcHm_v2.0_Chr7g0235311 Rosa chinensis HOM05D007120 ORTHO05D008881 2.6e-07 59.3 45 62.2
Gohir.A13G007800 Gossypium hirsutum HOM05D007120 ORTHO05D008881 3.4e-07 58.9 45 64.4
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 1.7e-06 56.6 45 62.2
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 2.2e-06 56.2 45 60.0
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 2.2e-06 56.2 45 60.0


User provided reference genes

Program Settings