Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.4e-102 376.3 197 100.0
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 3.9e-68 261.9 194 71.1
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 8.1e-66 254.2 206 63.1
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 2.6e-64 249.2 199 64.3
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.3e-59 232.3 198 62.1
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 4.3e-59 231.9 198 61.6
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 2.8e-58 229.2 197 59.9
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 2.4e-57 226.1 186 66.1
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 2.4e-57 226.1 193 59.6
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.2e-56 223.8 201 56.7
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.6e-56 222.6 202 56.9
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 4.5e-56 221.9 204 57.8
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 7.6e-56 221.1 171 66.7
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 7.6e-56 221.1 171 66.7
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 3.8e-55 218.8 195 60.5
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 4.9e-55 218.4 194 57.7
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 6.4e-55 218.0 170 64.1
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.9e-54 216.5 194 57.7
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 3.2e-54 215.7 206 57.3
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 4.2e-54 215.3 199 54.8
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 4.2e-54 215.3 207 59.4
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 5.4e-54 214.9 194 57.2
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 7.1e-54 214.5 201 59.7
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 9.3e-54 214.2 196 56.1
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.2e-53 213.8 196 55.6
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.6e-53 213.4 199 54.8
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 1.6e-53 213.4 199 54.3
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 1.6e-53 213.4 187 58.8
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 1.3e-52 210.3 199 54.3
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 2.3e-52 209.5 157 67.5
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 2.3e-52 209.5 206 52.9
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 3.9e-52 208.8 198 52.5
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 3.9e-52 208.8 191 59.7
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 1.6e-50 203.4 194 57.2
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.4e-49 200.3 193 55.4
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.4e-49 200.3 196 54.6
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.1e-49 199.1 187 54.5
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 4.0e-49 198.7 208 54.3
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 6.9e-49 198.0 205 52.7
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 6.9e-49 198.0 205 51.7
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 2.0e-48 196.4 147 64.6
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 3.4e-48 195.7 193 53.9
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 3.4e-48 195.7 140 66.4
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 4.5e-48 195.3 198 53.0
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.8e-48 194.9 187 54.5
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 7.6e-48 194.5 193 54.9
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.0e-47 194.1 181 54.1
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.9e-47 192.6 187 54.0
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 2.9e-47 192.6 189 52.9
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 2.9e-47 192.6 192 52.1
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 3.8e-47 192.2 195 51.8
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 4.9e-47 191.8 200 51.0
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 4.9e-47 191.8 200 49.5
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 4.9e-47 191.8 193 51.8
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 8.4e-47 191.0 192 54.7
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 2.7e-45 186.0 193 52.8
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 6.0e-45 184.9 194 50.0
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 7.9e-45 184.5 149 59.7
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 1.8e-44 183.3 179 54.2
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 5.7e-43 178.3 191 53.4
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 9.6e-43 177.6 203 49.8
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 2.8e-42 176.0 145 60.7
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 3.7e-42 175.6 164 56.1
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.4e-41 173.7 140 62.9
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 2.4e-41 172.9 172 51.7
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 9.0e-41 171.0 134 61.2
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 1.5e-40 170.2 187 50.3
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 2.0e-40 169.9 141 61.0
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 1.3e-39 167.2 198 49.5
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 2.7e-37 159.5 170 49.4
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 7.9e-37 157.9 188 45.2
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 3.0e-36 156.0 192 46.4
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 4.3e-35 152.1 195 46.7
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 2.2e-34 149.8 192 45.8
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 4.8e-34 148.7 191 45.0
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 6.3e-34 148.3 190 45.8
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 6.3e-34 148.3 139 59.7
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.1e-33 147.5 190 45.8
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 3.1e-33 146.0 189 43.9
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 3.1e-33 146.0 186 47.3
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 3.1e-33 146.0 186 47.3
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 6.9e-33 144.8 179 46.4
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 9.0e-33 144.4 197 44.2
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 2.0e-32 143.3 117 60.7
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 3.4e-32 142.5 187 44.9
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 4.5e-32 142.1 132 53.0
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 7.7e-32 141.4 175 45.1
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 1.3e-31 140.6 144 50.0
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 2.2e-31 139.8 192 43.2
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 2.5e-30 136.3 197 41.1
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 2.1e-29 133.3 188 43.1
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 3.6e-29 132.5 190 42.6
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 1.4e-28 130.6 150 49.3
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 1.0e-23 114.4 168 41.1
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.9e-22 110.2 78 67.9
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 3.3e-19 99.4 203 34.5
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 1.3e-18 97.4 121 44.6
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 2.4e-17 93.2 137 38.0
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 1.5e-14 84.0 120 42.5
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.6e-13 80.5 220 26.4
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.5e-11 73.9 168 33.3
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 2.6e-11 73.2 173 32.9


User provided reference genes

Program Settings