Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 0.0e+00 1212.2 627 100.0
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 5.3e-228 794.7 609 72.9
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 4.2e-225 785.0 656 68.0
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 4.8e-221 771.5 648 67.4
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.3e-213 746.9 632 66.5
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 6.3e-213 744.6 584 70.5
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 6.3e-213 744.6 584 70.5
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 4.5e-211 738.4 590 69.8
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.5e-209 732.6 576 69.3
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 7.2e-209 731.1 638 65.8
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.7e-208 729.2 559 71.9
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 8.0e-208 727.6 711 61.2
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.8e-205 719.2 663 62.7
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 3.8e-202 708.8 650 64.3
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.0e-202 708.4 626 64.5
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 8.5e-202 707.6 621 63.6
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.5e-201 706.8 542 69.9
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.9e-201 706.4 551 70.8
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 4.2e-201 705.3 594 66.7
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.8e-199 699.9 587 65.6
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 7.5e-198 694.5 580 67.1
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 8.3e-197 691.0 633 61.9
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 2.7e-195 686.0 557 67.3
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 4.5e-195 685.3 629 61.7
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 1.3e-194 683.7 611 63.7
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.3e-194 683.7 621 63.8
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 1.3e-194 683.7 628 63.1
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.7e-194 683.3 594 64.0
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 5.0e-194 681.8 632 63.0
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 2.5e-193 679.5 636 62.1
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 4.2e-193 678.7 612 63.4
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 5.5e-193 678.3 626 62.0
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.2e-192 677.2 630 61.4
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.6e-192 676.8 624 61.2
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 2.7e-192 676.0 610 63.9
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 1.8e-191 673.3 632 62.0
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 8.8e-191 671.0 583 64.0
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 2.0e-190 669.8 619 62.4
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 2.6e-190 669.5 636 61.3
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 5.7e-190 668.3 605 62.8
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.7e-189 666.8 627 61.7
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 4.9e-189 665.2 622 62.4
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 1.1e-188 664.1 618 61.5
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.1e-188 664.1 563 65.9
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.1e-188 664.1 598 61.9
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 1.4e-188 663.7 624 60.9
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 1.8e-188 663.3 540 66.3
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 2.4e-188 662.9 565 66.0
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 5.4e-188 661.8 565 65.7
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 5.4e-188 661.8 595 63.0
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 9.1e-188 661.0 595 63.0
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 9.1e-188 661.0 628 60.7
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 1.6e-187 660.2 587 63.2
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 2.0e-187 659.8 555 65.2
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 2.7e-187 659.4 587 63.4
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.3e-186 657.1 638 59.6
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 1.1e-185 654.1 565 65.3
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 1.1e-185 654.1 551 64.6
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 1.9e-185 653.3 565 65.1
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 4.2e-185 652.1 563 63.6
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 2.1e-184 649.8 547 64.9
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 2.8e-184 649.4 598 60.7
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.0e-183 647.5 592 62.5
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.4e-183 647.1 551 65.7
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 6.8e-183 644.8 532 65.2
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 1.7e-181 640.2 646 59.3
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 2.2e-181 639.8 628 60.5
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 4.1e-180 635.6 647 59.7
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 3.5e-179 632.5 592 61.3
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 1.3e-178 630.6 621 59.4
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.9e-177 626.7 532 64.1
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 8.0e-176 621.3 636 57.1
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 4.4e-174 615.5 607 60.3
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 7.5e-174 614.8 647 55.8
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 2.9e-173 612.8 545 62.4
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.2e-168 597.4 558 62.4
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 3.1e-167 592.8 581 58.7
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.3e-162 576.6 578 60.7
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 8.4e-157 558.1 611 54.8
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 1.4e-156 557.4 478 64.0
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.1e-156 555.8 527 62.4
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 3.0e-146 523.1 614 52.6
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.9e-141 506.5 466 61.4
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.2e-134 484.6 622 50.0
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 2.6e-134 483.4 463 62.2
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 4.3e-121 439.5 566 48.6
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 9.6e-121 438.3 427 60.9
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 4.8e-120 436.0 540 47.0
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.6e-118 430.3 458 57.9
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.3e-117 427.9 409 62.6
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 5.0e-117 426.0 447 58.2
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 9.3e-116 421.8 447 57.5
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 2.2e-109 400.6 403 58.6
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.8e-103 380.9 326 62.3
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 4.2e-92 343.2 445 48.3
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.2e-81 308.5 440 47.3
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 2.4e-79 300.8 574 38.0
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.9e-60 238.0 245 57.1
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.5e-57 228.4 174 71.3
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 2.4e-47 194.5 506 32.2
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 3.6e-35 154.1 157 56.1
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.4e-34 151.4 132 62.1
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 4.4e-33 147.1 97 71.1
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 6.4e-32 143.3 139 56.1
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-29 135.6 116 63.8
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.6e-28 130.2 165 46.1
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 9.6e-28 129.4 98 70.4
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 6.2e-27 126.7 341 28.4
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.5e-20 105.5 119 52.9
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.0e-18 97.4 61 73.8
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 9.9e-17 92.8 114 52.6
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 1.9e-15 88.6 93 57.0
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 3.5e-14 84.3 191 33.0
Atru.chr11.2546 Acer truncatum HOM05D006816 ORTHO05D008666 7.6e-09 66.6 72 52.8
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 6.5e-08 63.5 82 42.7
Atru.chr11.2547 Acer truncatum HOM05D006816 ORTHO05D008666 3.5e-06 57.8 42 69.0


User provided reference genes

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