Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 0.0e+00 1629.8 978 100.0
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 4.8e-260 901.7 890 64.3
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 7.3e-176 622.1 1068 45.8
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 6.2e-175 619.0 1062 47.2
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 1.3e-172 611.3 1047 48.6
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 7.1e-171 605.5 937 50.2
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 4.6e-170 602.8 928 48.3
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 1.5e-165 587.8 896 48.9
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.3e-164 584.7 903 46.8
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 1.7e-164 584.3 1000 48.3
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 6.4e-164 582.4 903 46.7
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.5e-163 580.5 918 47.6
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.9e-160 570.9 792 49.7
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.8e-158 564.3 885 48.8
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 1.2e-157 561.6 910 45.6
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 7.4e-152 542.3 1062 45.8
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 7.7e-149 532.3 791 48.4
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.2e-148 530.8 920 47.7
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 2.2e-148 530.8 558 57.7
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 4.2e-147 526.6 897 46.6
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 6.3e-143 512.7 696 49.9
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 5.3e-134 483.0 894 43.8
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 1.0e-132 478.8 924 44.6
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 1.5e-131 474.9 937 45.3
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 4.4e-128 463.4 900 43.3
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 9.7e-128 462.2 1055 41.9
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 2.2e-127 461.1 834 45.6
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 4.5e-125 453.4 879 43.5
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 3.8e-124 450.3 1029 42.1
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 1.0e-121 442.2 908 42.1
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 5.2e-121 439.9 895 41.6
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 6.8e-121 439.5 883 42.5
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 1.2e-120 438.7 717 47.0
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 9.7e-120 435.6 1041 40.9
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 5.9e-117 426.4 1003 42.3
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 1.3e-116 425.2 966 40.7
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 4.2e-115 420.2 978 39.8
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 7.2e-115 419.5 832 43.4
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 9.4e-115 419.1 1037 39.4
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 2.1e-114 417.9 1010 42.1
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 8.0e-114 416.0 1042 38.9
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 6.8e-113 412.9 759 42.4
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 8.8e-113 412.5 1010 41.8
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 7.5e-112 409.5 916 39.3
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.5e-109 400.6 832 41.7
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 2.5e-107 394.4 849 41.3
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 5.5e-107 393.3 883 40.7
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 7.2e-107 392.9 841 40.2
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 9.5e-107 392.5 1089 37.6
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 1.2e-106 392.1 845 41.5
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.0e-105 389.0 852 40.1
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 2.6e-104 384.4 920 39.0
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 2.6e-104 384.4 736 47.6
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 1.3e-103 382.1 804 41.4
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 1.7e-103 381.7 973 39.9
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 1.2e-101 375.6 862 39.7
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 3.5e-101 374.0 900 39.8
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 5.9e-101 373.2 854 39.8
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.7e-100 371.7 1036 39.5
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 1.5e-99 368.6 914 40.2
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 3.6e-98 364.0 850 39.4
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 8.9e-97 359.4 907 38.5
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 1.2e-96 359.0 916 38.2
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 9.8e-96 355.9 891 37.8
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 5.0e-92 343.6 875 37.1
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 4.3e-91 340.5 693 42.0
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 2.3e-89 334.7 908 36.6
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 4.4e-88 330.5 938 37.4
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 5.8e-88 330.1 908 35.1
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 1.0e-84 319.3 860 36.7
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 6.2e-82 310.1 983 35.5
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 8.9e-81 306.2 868 35.4
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 3.2e-78 297.7 875 34.9
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 2.7e-77 294.7 474 46.0
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 3.3e-75 287.7 781 36.4
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 3.1e-73 281.2 743 37.1
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 1.2e-72 279.3 1054 34.3
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 1.5e-72 278.9 766 35.1
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 6.0e-69 266.9 952 33.8
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 2.5e-67 261.5 894 33.4
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 3.6e-66 257.7 838 34.6
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 3.1e-65 254.6 1031 32.6
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 5.4e-62 243.8 461 41.0
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 1.0e-60 239.6 879 33.0
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 2.1e-58 231.9 929 32.4
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 2.6e-56 224.9 998 32.9
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 1.5e-51 209.1 891 32.0
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 8.1e-50 203.4 946 29.9
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 2.4e-49 201.8 855 31.5
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 5.3e-49 200.7 1006 30.3
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.5e-48 199.1 1010 30.9
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 3.3e-43 181.4 697 30.8
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 4.3e-43 181.0 884 29.1
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 1.6e-42 179.1 525 34.9
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 1.7e-39 169.1 653 32.6
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 1.1e-38 166.4 364 36.8
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 3.5e-37 161.4 904 29.5
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 1.3e-36 159.5 274 41.6
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 3.0e-36 158.3 805 30.1
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 1.5e-35 156.0 879 29.5
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 4.3e-35 154.5 911 29.3
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 1.8e-33 149.1 843 28.5
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 2.9e-31 141.7 922 28.6
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 1.0e-23 116.7 381 41.2
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 2.1e-21 109.0 153 46.4
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 1.8e-20 105.9 543 34.6
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 9.7e-19 100.1 552 30.1
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 1.8e-17 95.9 272 33.1
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 1.0e-15 90.1 130 45.4
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 2.2e-15 89.0 97 61.9
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 3.8e-15 88.2 195 41.5
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 4.7e-13 81.3 532 26.3
Lj6P812T17 Lonicera japonica HOM05D002002 ORTHO05D008797 2.6e-11 75.5 164 42.7
Lsat_1_v5_gn_0_41981 Lactuca sativa HOM05D002002 ORTHO05D008797 2.2e-10 72.4 114 44.7
TPR.G3088 Trifolium pratense HOM05D001978 ORTHO05D010457 8.5e-07 60.5 162 40.7


User provided reference genes

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