Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.3e-34 149.1 71 100.0
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 1.3e-34 149.1 71 100.0
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 1.7e-34 148.7 71 98.6
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 3.8e-34 147.5 71 98.6
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 3.8e-34 147.5 71 98.6
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 3.8e-34 147.5 71 98.6
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 3.8e-34 147.5 71 98.6
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 3.8e-34 147.5 71 98.6
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 3.8e-34 147.5 71 98.6
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 3.8e-34 147.5 71 98.6
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 5.0e-34 147.1 71 98.6
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 5.0e-34 147.1 71 98.6
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 6.6e-34 146.7 71 98.6
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 6.6e-34 146.7 71 98.6
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 1.5e-33 145.6 69 100.0
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 1.5e-33 145.6 69 100.0
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 1.5e-33 145.6 69 100.0
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 1.5e-33 145.6 71 97.2
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 1.5e-33 145.6 71 97.2
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 1.5e-33 145.6 71 97.2
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 2.5e-33 144.8 71 97.2
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 3.3e-33 144.4 71 97.2
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 4.3e-33 144.1 68 100.0
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 4.3e-33 144.1 68 100.0
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 5.6e-33 143.7 71 97.2
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 9.5e-33 142.9 68 100.0
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 9.5e-33 142.9 71 97.2
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 1.2e-32 142.5 70 97.1
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.2e-32 142.5 71 97.2
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 1.6e-32 142.1 71 97.2
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 1.0e-31 139.4 66 98.5
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 1.8e-31 138.7 70 92.9
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 2.3e-31 138.3 72 95.8
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 3.4e-30 134.4 67 95.5
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 1.3e-29 132.5 67 94.0
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 6.4e-29 130.2 62 100.0
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 6.4e-29 130.2 62 100.0
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 1.4e-28 129.0 64 95.3
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 4.1e-28 127.5 71 90.1
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 4.1e-28 127.5 71 90.1
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 3.5e-27 124.4 68 88.2
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.0e-26 122.9 63 90.5
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.5e-25 119.0 71 83.1
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 1.5e-25 119.0 71 83.1
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 1.5e-25 119.0 71 83.1
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 1.5e-25 119.0 71 83.1
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 1.5e-25 119.0 71 83.1
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 3.3e-25 117.9 61 91.8
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 5.6e-25 117.1 59 94.9
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.2e-24 115.9 71 80.3
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 1.6e-24 115.5 73 79.5
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 2.1e-24 115.2 56 96.4
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 4.7e-24 114.0 58 93.1
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 1.4e-23 112.5 56 94.6
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 1.4e-23 112.5 52 100.0
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 1.4e-23 112.5 52 100.0
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 1.8e-23 112.1 58 91.4
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 3.1e-23 111.3 74 77.0
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 5.2e-23 110.5 52 100.0
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 2.9e-21 104.8 50 100.0
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 3.7e-21 104.4 51 96.1
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 1.4e-20 102.4 54 94.4
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 1.6e-19 99.0 68 73.5
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 2.7e-19 98.2 46 100.0
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 7.8e-19 96.7 55 87.3
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 2.3e-18 95.1 47 93.6
Lalb_Chr20g0115471 Lupinus albus HOM05D000388 ORTHO05D004227 3.0e-18 94.7 57 80.7
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 6.6e-18 93.6 70 70.0
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 1.1e-17 92.8 54 83.3
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 3.3e-17 91.3 62 74.2
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 3.6e-16 87.8 67 62.7
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 1.1e-15 86.3 40 100.0
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.4e-15 85.9 41 100.0
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 2.3e-15 85.1 51 76.5
Gohir.A06G120306 Gossypium hirsutum HOM05D000388 ORTHO05D004227 3.1e-15 84.7 40 97.5
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 4.0e-15 84.3 69 65.2
Peaxi162Scf00284g01052 Petunia axillaris HOM05D000388 ORTHO05D004227 2.6e-14 81.6 50 80.0
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 1.3e-13 79.3 71 62.0
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 1.3e-13 79.3 71 60.6
GSVIVG01008500001 Vitis vinifera HOM05D000388 ORTHO05D004227 9.2e-12 73.2 53 67.9
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.6e-11 72.4 36 91.7
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 1.6e-11 72.4 36 94.4
Lsat_1_v5_gn_8_105481 Lactuca sativa HOM05D000388 ORTHO05D004227 5.6e-09 63.9 43 69.8
FAN07G1458 Fragaria x ananassa HOM05D000388 ORTHO05D004227 1.4e-07 59.3 32 84.4
Eucgr.J00123 Eucalyptus grandis HOM05D000388 ORTHO05D004227 1.5e-06 55.8 27 92.6


User provided reference genes

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