Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029883m.g Citrus clementina HOM05D014594 ORTHO05D018159 1.5e-244 849.4 512 100.0
Ciclev10002042m.g Citrus clementina HOM05D014594 ORTHO05D152014 6.3e-70 269.2 330 64.5
Ciclev10003259m.g Citrus clementina HOM05D014594 ORTHO05D018159 1.7e-35 154.8 131 64.1
Ciclev10002103m.g Citrus clementina HOM05D014594 ORTHO05D018159 8.1e-33 146.0 139 60.4
Ciclev10003136m.g Citrus clementina HOM05D014594 ORTHO05D018159 9.9e-31 139.0 122 66.4
Ciclev10004709m.g Citrus clementina HOM05D000520 ORTHO05D000399 5.4e-29 133.3 131 67.9
Atru.chr6.304 Acer truncatum HOM05D014594 ORTHO05D018159 1.2e-23 115.5 133 45.9
Atru.chr6.276 Acer truncatum HOM05D000112 ORTHO05D000564 2.9e-22 110.9 123 48.8
Ciclev10031100m.g Citrus clementina HOM05D001950 ORTHO05D001926 1.1e-18 99.0 152 44.1
Atru.chr6.283 Acer truncatum HOM05D014594 ORTHO05D018159 4.3e-18 97.1 127 44.1
Atru.chr1.2930 Acer truncatum HOM05D003873 ORTHO05D004127 2.8e-17 94.4 114 50.0
Atru.chr4.2566 Acer truncatum HOM05D000520 ORTHO05D000399 9.9e-15 85.9 108 56.5
Atru.chr7.1223 Acer truncatum HOM05D014594 ORTHO05D018159 2.4e-13 81.3 126 39.7
Gorai.006G054000 Gossypium raimondii HOM05D000520 ORTHO05D000399 3.5e-12 77.4 129 48.8
MSTRG.10015 Avicennia marina HOM05D000520 ORTHO05D000399 2.3e-11 74.7 109 56.9
Gohir.A09G054400 Gossypium hirsutum HOM05D000520 ORTHO05D000399 2.3e-11 74.7 130 50.8
Gohir.D09G053480 Gossypium hirsutum HOM05D000520 ORTHO05D000399 3.0e-11 74.3 129 47.3
Actinidia23478 Actinidia chinensis HOM05D000520 ORTHO05D000399 8.7e-11 72.8 123 48.0
Haze_00959 Corylus avellana HOM05D000520 ORTHO05D000399 3.3e-10 70.9 115 49.6
Actinidia00088 Actinidia chinensis HOM05D000520 ORTHO05D000399 2.8e-09 67.8 107 53.3
Thhalv10020810m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 4.0e-08 63.9 118 43.2
CiPaw.02G092700 Carya illinoinensis HOM05D000520 ORTHO05D000399 5.3e-08 63.5 111 50.5
MSTRG.24755 Avicennia marina HOM05D000520 ORTHO05D000399 6.9e-08 63.2 106 53.8
Thecc.04G222100 Theobroma cacao HOM05D000520 ORTHO05D000399 6.9e-08 63.2 134 46.3
Sp3g05080 Schrenkiella parvula HOM05D000520 ORTHO05D000399 1.2e-07 62.4 119 50.4
Cfa015585 Carpinus fangiana HOM05D000520 ORTHO05D000399 2.0e-07 61.6 116 46.6
MELO3C006564.2 Cucumis melo HOM05D000520 ORTHO05D000399 2.0e-07 61.6 114 44.7
Actinidia08516 Actinidia chinensis HOM05D000520 ORTHO05D000399 2.6e-07 61.2 90 62.2
BcaC03g13633 Brassica carinata HOM05D000520 ORTHO05D000399 2.6e-07 61.2 102 52.9
C02p10270 Brassica napus HOM05D000520 ORTHO05D000399 2.6e-07 61.2 102 52.9
BolC2t06934H Brassica oleracea HOM05D000520 ORTHO05D000399 2.6e-07 61.2 102 52.9
Duzib212G0287 Durio zibethinus HOM05D000520 ORTHO05D000399 3.4e-07 60.8 117 45.3
MSTRG.21832 Avicennia marina HOM05D000520 ORTHO05D000399 7.6e-07 59.7 107 50.5
Cc03_g03140 Coffea canephora HOM05D000520 ORTHO05D000399 9.9e-07 59.3 133 45.1
BcaC05g30053 Brassica carinata HOM05D000520 ORTHO05D000399 1.3e-06 58.9 47 61.7
Dinv38396 Davidia involucrata HOM05D000520 ORTHO05D000399 1.3e-06 58.9 108 53.7
BcaB05g23361 Brassica carinata HOM05D000520 ORTHO05D000399 2.2e-06 58.2 115 51.3
PGR031G0428 Punica granatum HOM05D000520 ORTHO05D000399 2.2e-06 58.2 54 57.4
A05p41870 Brassica napus HOM05D000520 ORTHO05D000399 2.9e-06 57.8 97 53.6
C05p61130 Brassica napus HOM05D000520 ORTHO05D000399 2.9e-06 57.8 97 53.6
BraA05t22906Z Brassica rapa HOM05D000520 ORTHO05D000399 2.9e-06 57.8 97 53.6
BolC5t34771H Brassica oleracea HOM05D000520 ORTHO05D000399 3.8e-06 57.4 117 49.6
CsaV3_3G013710 Cucumis sativus L. HOM05D000520 ORTHO05D000399 3.8e-06 57.4 113 42.5
Atru.chr6.303 Acer truncatum HOM05D063600 ORTHO05D052596 4.9e-06 57.0 108 40.7
A02p05190 Brassica napus HOM05D000520 ORTHO05D000399 4.9e-06 57.0 50 58.0
BraA02t05479Z Brassica rapa HOM05D000520 ORTHO05D000399 4.9e-06 57.0 50 58.0
COL.COLO4_21650 Corchorus olitorius HOM05D000520 ORTHO05D000399 8.4e-06 56.2 104 48.1


User provided reference genes

Program Settings