Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029678m.g Citrus clementina HOM05D002031 ORTHO05D002143 1.1e-47 193.0 94 100.0
Ciclev10000440m.g Citrus clementina HOM05D002031 ORTHO05D002143 5.3e-07 57.8 30 90.0
Cc08_g15620 Coffea canephora HOM05D002031 ORTHO05D002143 6.9e-07 57.4 31 87.1
FAN04G2466 Fragaria x ananassa HOM05D002031 ORTHO05D002143 6.9e-07 57.4 33 81.8
FvH4_5g26110 Fragaria vesca HOM05D002031 ORTHO05D002143 1.2e-06 56.6 30 90.0
FAN08G2579 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.2e-06 56.6 30 90.0
FAN18G3253 Fragaria x ananassa HOM05D002031 ORTHO05D002143 1.2e-06 56.6 30 90.0
Medtr5g032140 Medicago truncatula HOM05D002031 ORTHO05D002143 1.2e-06 56.6 30 90.0
RcHm_v2.0_Chr1g0329761 Rosa chinensis HOM05D002031 ORTHO05D002143 1.2e-06 56.6 30 90.0
RcHm_v2.0_Chr7g0195701 Rosa chinensis HOM05D002031 ORTHO05D002143 1.2e-06 56.6 30 90.0
MD14G1119100 Malus domestica HOM05D002031 ORTHO05D002143 2.6e-06 55.5 30 86.7
Prupe.5G113200 Prunus persica HOM05D002031 ORTHO05D002143 2.6e-06 55.5 30 86.7
TPR.G29977 Trifolium pratense HOM05D002031 ORTHO05D002143 2.6e-06 55.5 30 86.7
TPR.G33212 Trifolium pratense HOM05D002031 ORTHO05D002143 2.6e-06 55.5 30 86.7
CiPaw.11G125500 Carya illinoinensis HOM05D002031 ORTHO05D002143 3.4e-06 55.1 30 86.7
MD06G1099300 Malus domestica HOM05D002031 ORTHO05D002143 3.4e-06 55.1 30 83.3
unitig_22.g5671 Utricularia gibba HOM05D002031 ORTHO05D002143 3.4e-06 55.1 30 86.7
Aa31LG9G11010 Aethionema arabicum HOM05D002031 ORTHO05D002143 4.5e-06 54.7 36 75.0
A02p26340 Brassica napus HOM05D002031 ORTHO05D002143 4.5e-06 54.7 36 75.0
A03p29300 Brassica napus HOM05D002031 ORTHO05D002143 4.5e-06 54.7 36 75.0
BraA02t07636Z Brassica rapa HOM05D002031 ORTHO05D002143 4.5e-06 54.7 36 75.0
BraA03t12126Z Brassica rapa HOM05D002031 ORTHO05D002143 4.5e-06 54.7 36 75.0
Cpa.g.sc1603.1 Carica papaya HOM05D002031 ORTHO05D002143 4.5e-06 54.7 30 86.7
Manes.02G013600 Manihot esculenta HOM05D002031 ORTHO05D002143 4.5e-06 54.7 30 86.7
PGR042G2447 Punica granatum HOM05D002031 ORTHO05D002143 4.5e-06 54.7 30 86.7
THA.LOC104813032 Tarenaya hassleriana HOM05D002031 ORTHO05D002143 4.5e-06 54.7 30 86.7
CiPaw.12G086300 Carya illinoinensis HOM05D002031 ORTHO05D002143 5.9e-06 54.3 30 83.3
Haze_08696 Corylus avellana HOM05D002031 ORTHO05D002143 5.9e-06 54.3 30 86.7
HanXRQChr07g0188771 Helianthus annuus HOM05D002031 ORTHO05D002143 5.9e-06 54.3 30 86.7
Manes.01G048100 Manihot esculenta HOM05D002031 ORTHO05D002143 5.9e-06 54.3 30 83.3
Peaxi162Scf00074g01326 Petunia axillaris HOM05D002031 ORTHO05D002143 5.9e-06 54.3 30 83.3
Zm00001eb081790 Zea mays HOM05D002031 ORTHO05D002143 5.9e-06 54.3 30 86.7
Ca_22709_v3 Cicer arietinum L. HOM05D002031 ORTHO05D002143 7.7e-06 53.9 30 86.7
Migut.N02466 Erythranthe guttata HOM05D002031 ORTHO05D002143 7.7e-06 53.9 30 83.3
Psat2g083720 Pisum sativum HOM05D002031 ORTHO05D002143 7.7e-06 53.9 30 86.7
Solyc08g081900.4 Solanum lycopersicum HOM05D002031 ORTHO05D002143 7.7e-06 53.9 30 86.7
Sopen08g030190 Solanum pennellii HOM05D002031 ORTHO05D002143 7.7e-06 53.9 30 86.7
PGSC0003DMG400012166 Solanum tuberosum HOM05D002031 ORTHO05D002143 7.7e-06 53.9 30 86.7
TWI38G1341 Tripterygium wilfordii HOM05D002031 ORTHO05D002143 7.7e-06 53.9 30 86.7


User provided reference genes

Program Settings