Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029602m.g Citrus clementina HOM05D007887 ORTHO05D009725 5.3e-36 154.5 119 100.0
Prupe.6G095800 Prunus persica HOM05D007887 ORTHO05D009725 3.1e-12 75.5 43 83.7
FvH4_3g33040 Fragaria vesca HOM05D007887 ORTHO05D009725 6.9e-12 74.3 43 79.1
FAN16G3357 Fragaria x ananassa HOM05D007887 ORTHO05D009725 6.9e-12 74.3 43 79.1
FAN25G1511 Fragaria x ananassa HOM05D007887 ORTHO05D009725 6.9e-12 74.3 43 79.1
FAN11G2401 Fragaria x ananassa HOM05D007887 ORTHO05D009725 9.1e-12 73.9 43 79.1
MD11G1131400 Malus domestica HOM05D007887 ORTHO05D009725 9.1e-12 73.9 43 81.4
MD03G1112500 Malus domestica HOM05D007887 ORTHO05D009725 2.0e-11 72.8 43 81.4
RcHm_v2.0_Chr5g0060411 Rosa chinensis HOM05D007887 ORTHO05D009725 1.0e-10 70.5 43 79.1
Thecc.09G259300 Theobroma cacao HOM05D007887 ORTHO05D009725 1.7e-10 69.7 43 81.4
Manes.11G141900 Manihot esculenta HOM05D007887 ORTHO05D009725 2.9e-10 68.9 43 79.1
Manes.04G024800 Manihot esculenta HOM05D007887 ORTHO05D009725 8.5e-10 67.4 43 79.1
TAR633G0435 Trochodendron aralioides HOM05D007887 ORTHO05D009725 1.9e-09 66.2 43 76.7
CANSAT54G2812 Cannabis sativa HOM05D007887 ORTHO05D009725 2.5e-09 65.9 43 69.8
GSVIVG01025148001 Vitis vinifera HOM05D007887 ORTHO05D009725 2.5e-09 65.9 43 83.7
Cfa011356 Carpinus fangiana HOM05D007887 ORTHO05D009725 5.5e-09 64.7 43 74.4
CSS0010599 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 9.4e-09 63.9 43 74.4
CSS0013187 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 9.4e-09 63.9 43 74.4
HanXRQChr13g0404441 Helianthus annuus HOM05D007887 ORTHO05D009725 2.7e-08 62.4 43 60.5
CiPaw.13G108000 Carya illinoinensis HOM05D007887 ORTHO05D009725 4.7e-08 61.6 120 41.7
arahy.Tifrunner.gnm1.ann1.ZKT7Q5 Arachis hypogaea HOM05D007887 ORTHO05D009725 1.0e-07 60.5 43 69.8
Haze_23901 Corylus avellana HOM05D007887 ORTHO05D009725 1.8e-07 59.7 43 67.4
arahy.Tifrunner.gnm1.ann1.5EA918 Arachis hypogaea HOM05D007887 ORTHO05D009725 3.0e-07 58.9 43 67.4
Actinidia24082 Actinidia chinensis HOM05D007887 ORTHO05D009725 3.9e-07 58.5 43 69.8
Glyma.11G153796 Glycine max HOM05D007887 ORTHO05D009725 3.9e-07 58.5 43 67.4
arahy.Tifrunner.gnm1.ann1.QG78WL Arachis hypogaea HOM05D007887 ORTHO05D009725 5.1e-07 58.2 43 65.1
arahy.Tifrunner.gnm1.ann1.VU6S4B Arachis hypogaea HOM05D007887 ORTHO05D009725 6.7e-07 57.8 43 67.4
Glyma.12G071500 Glycine max HOM05D007887 ORTHO05D009725 8.8e-07 57.4 43 67.4
Aqoxy1G00528 Aquilegia oxysepala HOM05D007887 ORTHO05D009725 1.1e-06 57.0 43 67.4
Medtr4g060620 Medicago truncatula HOM05D007887 ORTHO05D009725 1.1e-06 57.0 43 65.1
PGR119G2346 Punica granatum HOM05D007887 ORTHO05D009725 1.1e-06 57.0 43 67.4
Lalb_Chr03g0027141 Lupinus albus HOM05D007887 ORTHO05D009725 2.0e-06 56.2 42 64.3
Eucgr.J00947 Eucalyptus grandis HOM05D007887 ORTHO05D009725 2.6e-06 55.8 43 69.8
Lj3g0011826 Lotus japonicus HOM05D007887 ORTHO05D009725 2.6e-06 55.8 42 66.7
Psat7g222640 Pisum sativum HOM05D007887 ORTHO05D009725 2.6e-06 55.8 43 65.1
PSO339G0915 Papaver somniferum HOM05D007887 ORTHO05D009725 3.3e-06 55.5 43 65.1
Lj3g0000190 Lotus japonicus HOM05D007887 ORTHO05D009725 4.4e-06 55.1 43 65.1
TPR.G36408 Trifolium pratense HOM05D007887 ORTHO05D009725 4.4e-06 55.1 43 62.8
Gohir.A13G220700 Gossypium hirsutum HOM05D037992 ORTHO05D009725 5.7e-06 54.7 43 62.8


User provided reference genes

Program Settings