Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.5e-84 316.2 165 100.0
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 7.3e-60 234.2 165 75.2
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 6.8e-58 227.6 164 73.8
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 9.8e-57 223.8 163 73.0
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.7e-56 223.0 163 72.4
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.1e-55 220.3 163 73.6
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.9e-55 219.5 163 70.6
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 3.2e-55 218.8 160 75.0
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 7.0e-55 217.6 163 73.6
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 9.2e-55 217.2 165 71.5
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 4.3e-52 208.4 167 70.1
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 9.5e-52 207.2 133 76.7
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 2.1e-51 206.1 165 69.7
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 6.2e-51 204.5 165 66.7
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.1e-50 203.8 133 74.4
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 1.1e-50 203.8 126 79.4
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 1.4e-50 203.4 162 67.9
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.4e-50 203.4 133 74.4
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.8e-50 203.0 131 74.8
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 4.0e-50 201.8 165 66.7
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 6.8e-50 201.1 163 68.7
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.5e-49 199.9 126 78.6
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 4.4e-49 198.4 131 77.1
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 5.8e-49 198.0 123 81.3
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.8e-49 198.0 129 74.4
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 4.9e-48 194.9 154 64.9
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 6.4e-48 194.5 131 74.0
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 6.4e-48 194.5 157 68.2
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 6.4e-48 194.5 164 64.6
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 8.3e-48 194.1 126 80.2
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.4e-47 193.4 164 64.6
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 1.9e-47 193.0 127 75.6
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 2.4e-47 192.6 165 63.6
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 5.4e-47 191.4 128 75.0
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 7.1e-47 191.0 168 64.3
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 7.1e-47 191.0 129 74.4
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 2.1e-46 189.5 129 76.0
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 2.1e-46 189.5 129 75.2
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 2.1e-46 189.5 167 61.1
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 1.0e-45 187.2 170 65.3
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.3e-45 186.0 149 63.1
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 5.1e-45 184.9 163 61.3
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 5.1e-45 184.9 166 60.2
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 6.6e-45 184.5 158 65.2
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 1.9e-44 183.0 134 69.4
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 1.9e-44 183.0 127 74.0
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.3e-44 181.8 129 71.3
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 9.5e-44 180.6 167 62.3
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.8e-43 179.1 174 62.1
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.8e-43 179.1 174 62.1
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.8e-43 179.1 174 62.1
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.8e-43 179.1 174 62.1
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.8e-43 179.1 174 62.1
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 2.8e-43 179.1 136 69.1
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 6.2e-43 177.9 172 61.0
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 8.1e-43 177.6 141 68.8
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.4e-42 176.8 165 58.8
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.8e-42 176.4 166 60.8
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.8e-42 176.4 127 69.3
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 2.3e-42 176.0 134 71.6
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 3.1e-42 175.6 145 62.8
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 3.1e-42 175.6 165 61.2
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 4.0e-42 175.3 130 72.3
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 8.9e-42 174.1 113 76.1
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 8.9e-42 174.1 165 58.2
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.5e-41 173.3 134 71.6
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 2.6e-41 172.6 164 59.8
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 5.8e-41 171.4 165 59.4
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 7.6e-41 171.0 137 68.6
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.3e-40 170.2 153 58.8
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.3e-40 170.2 147 63.3
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.2e-40 169.5 166 56.0
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 4.9e-40 168.3 129 65.9
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 4.1e-39 165.2 101 76.2
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 3.9e-37 158.7 128 63.3
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 6.6e-37 157.9 172 52.9
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 6.6e-37 157.9 114 71.9
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 8.6e-37 157.5 137 67.2
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 2.5e-36 156.0 138 63.0
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 9.6e-36 154.1 167 55.7
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 9.6e-36 154.1 162 56.2
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 2.1e-35 152.9 116 67.2
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 3.1e-34 149.1 97 73.2
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 2.2e-32 142.9 137 59.1
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 3.8e-32 142.1 160 54.4
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 6.4e-32 141.4 95 75.8
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.4e-31 140.2 134 59.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 4.2e-31 138.7 128 57.0
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.0e-29 134.0 148 57.4
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 6.2e-27 124.8 89 69.7
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 6.9e-26 121.3 92 70.7
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 3.4e-25 119.0 111 52.3
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 7.6e-25 117.9 123 49.6
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.3e-24 117.1 110 56.4
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 1.3e-24 117.1 71 69.0
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.7e-24 116.7 156 48.1
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.5e-20 103.6 117 46.2
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 1.5e-20 103.6 130 46.9
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 3.6e-19 99.0 116 51.7
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.0e-17 93.2 114 45.6
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 4.5e-17 92.0 119 42.9
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 4.5e-17 92.0 114 44.7
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 8.7e-13 77.8 66 60.6
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 2.5e-12 76.3 118 41.5
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 1.1e-10 70.9 125 38.4
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 9.0e-10 67.8 70 55.7
FAN16G2470 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.9e-08 62.8 52 69.2


User provided reference genes

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