Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 2.7e-78 295.4 166 100.0
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 1.2e-46 190.3 146 62.3
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 2.1e-46 189.5 168 57.7
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 2.1e-46 189.5 97 88.7
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 2.1e-46 189.5 165 58.2
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 2.7e-46 189.1 100 86.0
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 2.7e-46 189.1 100 86.0
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 4.6e-46 188.3 100 85.0
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 4.6e-46 188.3 98 85.7
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 6.0e-46 188.0 103 81.6
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 1.3e-45 186.8 95 88.4
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 2.3e-45 186.0 98 85.7
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 3.0e-45 185.7 102 83.3
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 8.7e-45 184.1 94 88.3
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 8.7e-45 184.1 107 80.4
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.1e-44 183.7 97 84.5
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 1.1e-44 183.7 99 81.8
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 1.5e-44 183.3 102 83.3
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.5e-44 183.3 102 83.3
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.5e-44 183.3 99 83.8
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 2.5e-44 182.6 100 85.0
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 3.3e-44 182.2 107 79.4
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 5.6e-44 181.4 101 81.2
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 7.3e-44 181.0 97 82.5
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 7.3e-44 181.0 112 80.4
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 9.6e-44 180.6 97 86.6
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 1.6e-43 179.9 106 77.4
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 1.6e-43 179.9 98 82.7
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 2.1e-43 179.5 98 81.6
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.1e-43 179.5 98 81.6
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 3.6e-43 178.7 163 61.3
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 8.1e-43 177.6 97 83.5
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 1.1e-42 177.2 99 78.8
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.1e-42 177.2 98 80.6
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 1.1e-42 177.2 100 85.0
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 1.3e-40 170.2 96 79.2
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.7e-40 169.9 108 71.3
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 2.2e-40 169.5 96 78.1
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 3.8e-40 168.7 95 78.9
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 3.8e-40 168.7 101 75.2
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 6.4e-40 167.9 96 78.1
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 1.9e-39 166.4 92 80.4
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 3.2e-39 165.6 105 74.3
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.6e-38 163.3 92 78.3
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 2.7e-38 162.5 103 75.7
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 3.5e-38 162.2 104 72.1
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 4.6e-38 161.8 101 72.3
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 3.9e-37 158.7 107 71.0
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 8.7e-37 157.5 99 72.7
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 8.7e-37 157.5 97 75.3
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 1.5e-36 156.8 110 74.5
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.5e-36 156.8 107 71.0
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 1.9e-36 156.4 100 73.0
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 1.9e-36 156.4 100 73.0
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 1.9e-36 156.4 100 73.0
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 1.9e-36 156.4 100 73.0
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.9e-36 156.4 100 73.0
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.9e-36 156.4 107 70.1
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 4.3e-36 155.2 107 69.2
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 7.4e-36 154.5 107 69.2
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 9.6e-36 154.1 107 68.2
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 9.6e-36 154.1 100 72.0
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 9.6e-36 154.1 107 68.2
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 1.3e-35 153.7 100 72.0
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 1.3e-35 153.7 105 68.6
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 3.7e-35 152.1 107 69.2
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 6.2e-35 151.4 98 72.4
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.8e-34 149.8 100 71.0
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 1.8e-34 149.8 104 69.2
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 4.0e-34 148.7 100 70.0
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 5.3e-34 148.3 104 67.3
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 4.5e-33 145.2 103 65.0
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 7.6e-33 144.4 75 85.3
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 1.0e-32 144.1 86 76.7
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 1.7e-32 143.3 97 70.1
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 5.5e-31 138.3 79 81.0
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 7.1e-31 137.9 102 67.6
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 7.1e-31 137.9 104 67.3
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 7.1e-31 137.9 82 81.7
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 1.6e-30 136.7 97 61.9
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.6e-30 136.7 98 67.3
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.6e-30 136.7 98 67.3
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 4.6e-30 135.2 78 76.9
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.8e-29 133.3 97 61.9
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 3.3e-28 129.0 101 63.4
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 9.6e-28 127.5 108 59.3
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 4.5e-25 118.6 89 67.4
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 8.4e-24 114.4 70 75.7
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 1.6e-22 110.2 66 74.2
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 7.9e-22 107.8 69 78.3
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 3.0e-21 105.9 116 53.4
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 5.1e-21 105.1 73 72.6
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 1.5e-20 103.6 95 49.5
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 4.3e-20 102.1 67 79.1
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 4.8e-19 98.6 70 67.1
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 2.4e-18 96.3 66 68.2
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 5.3e-18 95.1 64 71.9
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 1.3e-16 90.5 94 50.0
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 2.2e-16 89.7 84 47.6
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 3.8e-16 89.0 83 53.0
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 1.1e-15 87.4 71 57.7
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 1.4e-15 87.0 109 46.8
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 1.0e-13 80.9 62 66.1
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 5.1e-13 78.6 55 72.7
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 8.8e-13 77.8 88 47.7
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 2.0e-09 66.6 77 44.2


User provided reference genes

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