Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029272m.g Citrus clementina HOM05D005311 ORTHO05D006160 8.6e-114 413.7 213 100.0
Atru.chr5.2262 Acer truncatum HOM05D005311 ORTHO05D006160 4.3e-81 305.1 218 72.0
CiPaw.05G021200 Carya illinoinensis HOM05D005311 ORTHO05D006160 5.7e-73 278.1 221 68.3
GSVIVG01037044001 Vitis vinifera HOM05D005311 ORTHO05D006160 5.3e-71 271.6 218 67.9
Manes.07G056400 Manihot esculenta HOM05D005311 ORTHO05D006160 2.0e-70 269.6 220 67.3
COL.COLO4_32478 Corchorus olitorius HOM05D005311 ORTHO05D006160 1.3e-69 266.9 218 66.1
TWI14G0308 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 5.0e-69 265.0 220 67.3
Thecc.02G120600 Theobroma cacao HOM05D005311 ORTHO05D006160 6.5e-69 264.6 217 65.9
MD10G1111900 Malus domestica HOM05D005311 ORTHO05D006160 8.5e-69 264.2 228 64.5
Duzib052G0370 Durio zibethinus HOM05D005311 ORTHO05D006160 1.2e-67 260.4 218 64.7
MD05G1106900 Malus domestica HOM05D005311 ORTHO05D006160 2.7e-67 259.2 226 62.8
Gohir.A03G180600 Gossypium hirsutum HOM05D005311 ORTHO05D006160 1.4e-66 256.9 217 63.6
TWI59G0049 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 1.8e-66 256.5 220 65.0
Gohir.D02G203104 Gossypium hirsutum HOM05D005311 ORTHO05D006160 2.3e-66 256.1 220 64.1
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 6.7e-66 254.6 169 71.6
Potri.009G084800 Populus trichocarpa HOM05D005311 ORTHO05D006160 3.3e-65 252.3 222 64.0
TAR628G1269 Trochodendron aralioides HOM05D005311 ORTHO05D006160 3.3e-65 252.3 177 70.1
Gorai.005G229500 Gossypium raimondii HOM05D005311 ORTHO05D006160 1.3e-64 250.4 220 62.7
Gohir.D12G019000 Gossypium hirsutum HOM05D005311 ORTHO05D006160 6.3e-64 248.1 217 62.2
Potri.001G289400 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.4e-63 246.9 213 63.8
FvH4_2g03130 Fragaria vesca HOM05D005311 ORTHO05D006160 1.8e-63 246.5 220 62.3
Gorai.008G019300 Gossypium raimondii HOM05D005311 ORTHO05D006160 1.8e-63 246.5 217 61.8
Gohir.A12G018400 Gossypium hirsutum HOM05D005311 ORTHO05D006160 2.4e-63 246.1 217 62.2
arahy.Tifrunner.gnm1.ann1.KVB0K0 Arachis hypogaea HOM05D005311 ORTHO05D006160 6.9e-63 244.6 229 60.7
Medtr1g105970 Medicago truncatula HOM05D005311 ORTHO05D006160 4.5e-62 241.9 208 63.5
QL11p029204 Quercus lobata HOM05D005311 ORTHO05D006160 5.9e-62 241.5 242 57.9
TAR625G0307 Trochodendron aralioides HOM05D005311 ORTHO05D006160 5.9e-62 241.5 206 64.1
Glyma.10G255200 Glycine max HOM05D005311 ORTHO05D006160 1.3e-61 240.4 214 62.1
Ca_11020_v3 Cicer arietinum L. HOM05D005311 ORTHO05D006160 1.7e-61 240.0 212 62.7
FAN24G0492 Fragaria x ananassa HOM05D005311 ORTHO05D006160 2.9e-61 239.2 224 60.7
Rhsim11G0150000 Rhododendron simsii HOM05D005311 ORTHO05D006160 2.9e-61 239.2 224 61.2
Sed0009957 Sechium edule HOM05D005311 ORTHO05D006160 2.9e-61 239.2 227 61.2
CSS0009611 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 3.8e-61 238.8 174 70.1
Phvul.007G047500 Phaseolus vulgaris HOM05D005311 ORTHO05D006160 3.8e-61 238.8 214 60.7
FAN20G1889 Fragaria x ananassa HOM05D005311 ORTHO05D006160 5.0e-61 238.4 224 60.3
Lalb_Chr21g0307981 Lupinus albus HOM05D005311 ORTHO05D006160 1.1e-60 237.3 222 59.5
FAN27G0024 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.4e-60 236.9 224 59.8
Lalb_Chr16g0376301 Lupinus albus HOM05D005311 ORTHO05D006160 4.2e-60 235.3 215 61.9
Cpa.g.sc106.28 Carica papaya HOM05D005311 ORTHO05D006160 1.2e-59 233.8 272 53.7
Cc02_g20120 Coffea canephora HOM05D005311 ORTHO05D006160 1.2e-59 233.8 205 62.4
Actinidia00352 Actinidia chinensis HOM05D005311 ORTHO05D006160 2.7e-59 232.6 185 63.2
Actinidia02445 Actinidia chinensis HOM05D005311 ORTHO05D006160 3.6e-59 232.3 175 65.7
MELO3C018026.2 Cucumis melo HOM05D005311 ORTHO05D006160 4.7e-59 231.9 223 59.6
FAN15G1540 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.0e-58 230.7 216 60.2
CANSAT25G3378 Cannabis sativa HOM05D005311 ORTHO05D006160 1.4e-58 230.3 224 59.4
Lsat_1_v5_gn_9_113920 Lactuca sativa HOM05D005311 ORTHO05D006160 2.3e-58 229.6 180 68.9
RcHm_v2.0_Chr6g0248001 Rosa chinensis HOM05D005311 ORTHO05D006160 5.1e-58 228.4 251 54.2
Lj5g0014269 Lotus japonicus HOM05D005311 ORTHO05D006160 1.5e-57 226.9 210 60.5
Nn6g32054 Nelumbo nucifera HOM05D005311 ORTHO05D006160 2.0e-57 226.5 154 74.0
Aqoxy5G01939 Aquilegia oxysepala HOM05D005311 ORTHO05D006160 3.3e-57 225.7 205 61.0
arahy.Tifrunner.gnm1.ann1.QK2693 Arachis hypogaea HOM05D005311 ORTHO05D006160 3.3e-57 225.7 155 74.2
Eucgr.I02500 Eucalyptus grandis HOM05D005311 ORTHO05D006160 9.7e-57 224.2 226 60.2
PGSC0003DMG400025735 Solanum tuberosum HOM05D005311 ORTHO05D006160 1.7e-56 223.4 176 64.8
Nitab4.5_0000772g0050 Nicotiana tabacum HOM05D005311 ORTHO05D006160 2.8e-56 222.6 225 58.7
Sopen01g049100 Solanum pennellii HOM05D005311 ORTHO05D006160 2.8e-56 222.6 176 64.2
Lalb_Chr02g0144871 Lupinus albus HOM05D005311 ORTHO05D006160 3.7e-56 222.2 224 57.1
Solyc01g106790.3 Solanum lycopersicum HOM05D005311 ORTHO05D006160 3.7e-56 222.2 176 63.6
Nitab4.5_0009103g0020 Nicotiana tabacum HOM05D005311 ORTHO05D006160 4.8e-56 221.9 223 58.7
Glyma.20G136100 Glycine max HOM05D005311 ORTHO05D006160 6.3e-56 221.5 214 58.4
ECA240G0703 Erigeron canadensis HOM05D005311 ORTHO05D006160 3.1e-55 219.2 216 60.2
THA.LOC104815219 Tarenaya hassleriana HOM05D005311 ORTHO05D006160 5.3e-55 218.4 217 59.4
VMungo0720G0066 Vigna mungo HOM05D005311 ORTHO05D006160 5.3e-55 218.4 158 71.5
Lsat_1_v5_gn_7_84560 Lactuca sativa HOM05D005311 ORTHO05D006160 2.0e-54 216.5 176 62.5
ATR0767G087 Amborella trichopoda HOM05D005311 ORTHO05D006160 2.6e-54 216.1 215 58.6
Peaxi162Scf00016g03127 Petunia axillaris HOM05D005311 ORTHO05D006160 3.5e-54 215.7 220 57.3
Sc18g0007330 Simmondsia chinensis HOM05D005311 ORTHO05D006160 3.5e-54 215.7 213 56.8
CAN.G606.76 Capsicum annuum HOM05D005311 ORTHO05D006160 4.5e-54 215.3 223 55.6
MSTRG.16668 Avicennia marina HOM05D005311 ORTHO05D006160 5.9e-54 214.9 171 66.7
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 1.0e-53 214.2 172 65.7
ClCG10G010010 Citrullus lanatus HOM05D005311 ORTHO05D006160 1.0e-53 214.2 157 72.0
SalBow6G1857 Salvia bowleyana HOM05D005311 ORTHO05D006160 1.7e-53 213.4 174 64.4
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 2.2e-53 213.0 154 68.2
Migut.B00474 Erythranthe guttata HOM05D005311 ORTHO05D006160 6.5e-53 211.5 173 62.4
HanXRQChr15g0495651 Helianthus annuus HOM05D005311 ORTHO05D006160 8.5e-53 211.1 216 56.5
SGA_v2.0_scaffold32G12981 Striga asiatica HOM05D005311 ORTHO05D006160 3.2e-52 209.1 173 62.4
Thhalv10011774m.g Eutrema salsugineum HOM05D005311 ORTHO05D006160 2.1e-51 206.5 219 57.1
Hund00418 Selenicereus undatus HOM05D005311 ORTHO05D006160 4.7e-51 205.3 200 57.5
Carub.0001s3920 Capsella rubella HOM05D005311 ORTHO05D006160 6.1e-51 204.9 218 56.0
CsaV3_4G000050 Cucumis sativus L. HOM05D005311 ORTHO05D006160 6.1e-51 204.9 154 69.5
ECA236G2995 Erigeron canadensis HOM05D000211 ORTHO05D002517 6.1e-51 204.9 172 62.2
Sp1g36880 Schrenkiella parvula HOM05D005311 ORTHO05D006160 8.0e-51 204.5 205 60.0
vmacro01940 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 3.0e-50 202.6 181 61.3
AL1G57590 Arabidopsis lyrata HOM05D005311 ORTHO05D006160 1.1e-49 200.7 218 56.4
Prupe.8G151000 Prunus persica HOM05D005311 ORTHO05D006160 1.1e-49 200.7 182 62.6
Lj9A337G44 Lonicera japonica HOM05D005311 ORTHO05D006160 1.5e-49 200.3 158 66.5
PSO210G6612 Papaver somniferum HOM05D005311 ORTHO05D006160 2.6e-49 199.5 223 53.4
AUR62027028 Chenopodium quinoa HOM05D005311 ORTHO05D006160 3.3e-49 199.1 212 55.2
BolC3t21257H Brassica oleracea HOM05D005311 ORTHO05D006160 4.4e-49 198.7 208 57.7
DCAR_021939 Daucus carota HOM05D005311 ORTHO05D006160 5.7e-49 198.4 150 70.0
AUR62030871 Chenopodium quinoa HOM05D005311 ORTHO05D006160 9.7e-49 197.6 212 53.3
AT1G50020 Arabidopsis thaliana HOM05D005311 ORTHO05D006160 2.8e-48 196.1 216 55.1
A08p03390 Brassica napus HOM05D005311 ORTHO05D006160 3.7e-48 195.7 213 54.9
Duzib132G0391 Durio zibethinus HOM05D005311 ORTHO05D006160 4.8e-48 195.3 217 52.5
PSO447G0012 Papaver somniferum HOM05D005311 ORTHO05D006160 4.8e-48 195.3 220 53.6
Ah.01g024570 Amaranthus hybridus HOM05D005311 ORTHO05D006160 1.1e-47 194.1 163 63.2
BraA08t32371Z Brassica rapa HOM05D005311 ORTHO05D006160 1.1e-47 194.1 211 54.5
CARHR040130 Cardamine hirsuta HOM05D005311 ORTHO05D006160 9.1e-47 191.0 216 54.6
BcaC08g43180 Brassica carinata HOM05D005311 ORTHO05D006160 2.7e-46 189.5 214 56.5
A06p03410 Brassica napus HOM05D005311 ORTHO05D006160 2.7e-46 189.5 214 56.1
BolC6t35609H Brassica oleracea HOM05D005311 ORTHO05D006160 2.7e-46 189.5 214 56.5
BraA06t23549Z Brassica rapa HOM05D005311 ORTHO05D006160 4.5e-46 188.7 214 56.5
GSVIVG01009264001 Vitis vinifera HOM05D005311 ORTHO05D006160 4.5e-46 188.7 171 58.5
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 5.9e-46 188.3 166 60.8
BcaB07g33454 Brassica carinata HOM05D005311 ORTHO05D006160 5.9e-46 188.3 214 57.0
C03p89430 Brassica napus HOM05D005311 ORTHO05D006160 1.0e-45 187.6 158 63.9
C06p04800 Brassica napus HOM05D005311 ORTHO05D006160 2.9e-45 186.0 214 55.6
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 8.5e-45 184.5 143 67.1
Oeu037294.1 Olea europaea HOM05D005311 ORTHO05D006160 9.4e-44 181.0 145 66.2
HanXRQChr03g0073011 Helianthus annuus HOM05D005311 ORTHO05D006160 5.2e-42 175.3 219 52.1
Dinv09534 Davidia involucrata HOM05D000211 ORTHO05D002517 3.4e-41 172.6 172 56.4
Psat6g210680 Pisum sativum HOM05D005311 ORTHO05D006160 1.3e-40 170.6 128 69.5
Sabra09G0065400 Salix brachista HOM05D000308 ORTHO05D002517 1.3e-40 170.6 112 76.8
TPR.G21150 Trifolium pratense HOM05D005311 ORTHO05D006160 3.7e-40 169.1 129 68.2
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 1.2e-38 164.1 154 56.5
unitig_61.g26039 Utricularia gibba HOM05D005311 ORTHO05D006160 1.2e-38 164.1 165 52.7
EL10Ac9g22172 Beta vulgaris HOM05D005311 ORTHO05D006160 1.0e-37 161.0 183 55.7
arahy.Tifrunner.gnm1.ann1.YXS8EF Arachis hypogaea HOM05D005311 ORTHO05D006160 5.0e-37 158.7 141 61.7
Zm00001eb201730 Zea mays HOM05D005311 ORTHO05D006160 1.1e-36 157.5 214 48.1
BcaB04g17278 Brassica carinata HOM05D005311 ORTHO05D006160 4.2e-36 155.6 137 62.0
PGR142G3492 Punica granatum HOM05D005311 ORTHO05D006160 1.2e-33 147.5 218 45.4
unitig_60.g25463 Utricularia gibba HOM05D005311 ORTHO05D006160 3.4e-33 146.0 209 45.9
Os11g0549900 Oryza sativa ssp. japonica HOM05D005311 ORTHO05D006160 4.4e-33 145.6 153 56.2
TAR365G0893 Trochodendron aralioides HOM05D005311 ORTHO05D006160 5.9e-30 135.2 116 63.8
Oeu025305.1 Olea europaea HOM05D005311 ORTHO05D006160 6.6e-29 131.7 119 60.5
Dinv44912 Davidia involucrata HOM05D005311 ORTHO05D006160 5.6e-28 128.6 120 60.8
arahy.Tifrunner.gnm1.ann1.YSC4AN Arachis hypogaea HOM05D005311 ORTHO05D006160 3.0e-26 122.9 140 50.0
CDE04G0288 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 1.2e-25 120.9 87 69.0
Oeu037691.1 Olea europaea HOM05D005311 ORTHO05D006160 1.5e-25 120.6 95 68.4
SMO118G0105 Selaginella moellendorffii HOM05D005311 ORTHO05D006160 1.5e-25 120.6 180 40.6
Haze_10287 Corylus avellana HOM05D005311 ORTHO05D006160 9.8e-25 117.9 86 68.6
CSS0025480 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 1.7e-24 117.1 150 49.3
Cfa004693 Carpinus fangiana HOM05D005311 ORTHO05D006160 1.8e-23 113.6 78 74.4
arahy.Tifrunner.gnm1.ann1.6ZTX4G Arachis hypogaea HOM05D005311 ORTHO05D006160 3.2e-23 112.8 147 44.9
SGA_v2.0_scaffold225G43064 Striga asiatica HOM05D005311 ORTHO05D006160 4.1e-23 112.5 95 63.2
Pp3c9_20640 Physcomitrium patens HOM05D005311 ORTHO05D006160 9.2e-23 111.3 156 44.9
Mapoly0159s0003 Marchantia polymorpha HOM05D005311 ORTHO05D006160 6.6e-21 105.1 169 40.2
vmacro22259 Vaccinium macrocarpon HOM05D005311 ORTHO05D006160 1.5e-20 104.0 93 59.1
CDE02G0336 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 9.5e-20 101.3 103 55.3
AagrBONN_evm.TU.Sc2ySwM_340.346 Anthoceros agrestis HOM05D005311 ORTHO05D006160 1.0e-18 97.8 167 38.3
Rhsim05G0093200 Rhododendron simsii HOM05D005311 ORTHO05D006160 4.0e-18 95.9 200 39.0
Dinv16067 Davidia involucrata HOM05D005311 ORTHO05D006160 7.5e-17 91.7 118 52.5
arahy.Tifrunner.gnm1.ann1.HG6PX3 Arachis hypogaea HOM05D005311 ORTHO05D006160 2.4e-15 86.7 135 39.3
HPP92_006035 Vanilla planifolia HOM05D005311 ORTHO05D006160 9.2e-15 84.7 110 54.5
arahy.Tifrunner.gnm1.ann1.TC5M0Q Arachis hypogaea HOM05D005311 ORTHO05D006160 2.0e-14 83.6 130 38.5
CARHR113150 Cardamine hirsuta HOM05D005311 ORTHO05D006160 5.6e-12 75.5 52 69.2
SEGI_31449 Sequoiadendron giganteum HOM05D005311 ORTHO05D006160 1.6e-11 73.9 84 58.3
Cre14.g614000 Chlamydomonas reinhardtii HOM05D005311 ORTHO05D006160 3.6e-11 72.8 88 46.6
CBR_g12748 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-07 60.1 71 46.5
CSS0010436 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 5.4e-07 58.9 42 71.4


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