Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10027461m.g Citrus clementina HOM05D007574 ORTHO05D007552 6.0e-42 173.7 85 100.0
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 3.2e-11 71.6 89 47.2
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 7.9e-10 67.0 89 48.3
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 1.0e-09 66.6 100 45.0
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 2.3e-09 65.5 79 45.6
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 3.9e-09 64.7 47 61.7
COL.COLO4_18585 Corchorus olitorius HOM05D007574 ORTHO05D007552 3.9e-09 64.7 86 48.8
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 1.5e-08 62.8 92 42.4
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 1.9e-08 62.4 100 42.0
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 1.9e-08 62.4 92 40.2
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 3.3e-08 61.6 90 42.2
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 3.3e-08 61.6 95 41.1
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 3.3e-08 61.6 95 41.1
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 4.3e-08 61.2 46 56.5
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 5.7e-08 60.8 48 56.2
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 5.7e-08 60.8 101 40.6
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 5.7e-08 60.8 81 45.7
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 7.4e-08 60.5 88 44.3
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 9.7e-08 60.1 88 39.8
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 9.7e-08 60.1 99 36.4
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 1.3e-07 59.7 46 56.5
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 1.3e-07 59.7 50 58.0
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 1.3e-07 59.7 99 43.4
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 1.3e-07 59.7 47 55.3
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 2.2e-07 58.9 96 40.6
Prupe.6G068600 Prunus persica HOM05D007574 ORTHO05D007552 2.2e-07 58.9 92 43.5
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 2.2e-07 58.9 53 52.8
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 2.8e-07 58.5 46 58.7
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 3.7e-07 58.2 82 41.5
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 4.8e-07 57.8 46 56.5
Thecc.09G313900 Theobroma cacao HOM05D007574 ORTHO05D007552 4.8e-07 57.8 72 50.0
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 6.3e-07 57.4 47 53.2
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 6.3e-07 57.4 46 58.7
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 6.3e-07 57.4 47 57.4
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 8.2e-07 57.0 47 57.4
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 8.2e-07 57.0 46 54.3
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.1e-06 56.6 99 41.4
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 1.1e-06 56.6 99 41.4
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 1.1e-06 56.6 47 51.1
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 1.1e-06 56.6 48 52.1
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 1.4e-06 56.2 83 41.0
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 1.4e-06 56.2 73 43.8
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 2.4e-06 55.5 79 38.0
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 2.4e-06 55.5 62 43.5
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 3.1e-06 55.1 69 40.6
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 3.1e-06 55.1 47 55.3
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 6.9e-06 53.9 46 52.2
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 9.1e-06 53.5 72 43.1
PSO675G0145 Papaver somniferum HOM05D007574 ORTHO05D007552 9.1e-06 53.5 70 41.4
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 9.1e-06 53.5 46 52.2


User provided reference genes

Program Settings