Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10027432m.g Citrus clementina HOM05D010859 ORTHO05D010098 5.2e-57 224.2 113 100.0
Ciclev10027431m.g Citrus clementina HOM05D010859 ORTHO05D010098 2.0e-56 222.2 113 98.2
Ciclev10027186m.g Citrus clementina HOM05D010859 ORTHO05D010098 7.5e-40 167.2 109 78.9
Ciclev10027310m.g Citrus clementina HOM05D010859 ORTHO05D010098 2.2e-23 112.5 76 77.6
Gorai.003G039700 Gossypium raimondii HOM05D010752 ORTHO05D010098 2.8e-10 68.9 52 75.0
Gohir.A02G142703 Gossypium hirsutum HOM05D010859 ORTHO05D010098 1.1e-09 67.0 52 73.1
MELO3C017608.2 Cucumis melo HOM05D015543 ORTHO05D010098 1.8e-09 66.2 58 63.8
Thecc.01G099700 Theobroma cacao HOM05D010859 ORTHO05D010098 1.8e-09 66.2 46 71.7
COL.COLO4_27262 Corchorus olitorius HOM05D025948 ORTHO05D010098 2.3e-09 65.9 66 59.1
Medtr3g087110 Medicago truncatula HOM05D016009 ORTHO05D010098 2.3e-09 65.9 59 54.2
COL.COLO4_27263 Corchorus olitorius HOM05D010859 ORTHO05D010098 3.1e-09 65.5 47 70.2
Thecc.01G099800 Theobroma cacao HOM05D025948 ORTHO05D010098 3.1e-09 65.5 62 58.1
Cfa002643 Carpinus fangiana HOM05D010859 ORTHO05D010098 4.0e-09 65.1 115 40.0
VMungo1383G1117 Vigna mungo HOM05D016009 ORTHO05D010098 4.0e-09 65.1 47 68.1
Glyma.18G016600 Glycine max HOM05D016009 ORTHO05D010098 6.8e-09 64.3 63 55.6
Dinv13200 Davidia involucrata HOM05D010024 ORTHO05D011647 8.9e-09 63.9 64 57.8
TAR625G0027 Trochodendron aralioides HOM05D010024 ORTHO05D010098 1.2e-08 63.5 115 38.3
Sed0012693 Sechium edule HOM05D015543 ORTHO05D010098 5.8e-08 61.2 67 52.2
ClCG07G017350 Citrullus lanatus HOM05D015543 ORTHO05D010098 1.3e-07 60.1 44 65.9
THA.LOC104804163 Tarenaya hassleriana HOM05D010752 ORTHO05D010098 1.3e-07 60.1 103 38.8
Manes.13G093800 Manihot esculenta HOM05D010859 ORTHO05D010098 1.7e-07 59.7 46 67.4
BraA04t17314Z Brassica rapa HOM05D010752 ORTHO05D010098 2.9e-07 58.9 99 43.4
Ciclev10027542m.g Citrus clementina HOM05D010859 ORTHO05D010098 4.9e-07 58.2 112 40.2
COL.COLO4_27261 Corchorus olitorius HOM05D010859 ORTHO05D010098 4.9e-07 58.2 41 68.3
Lalb_Chr11g0075401 Lupinus albus HOM05D016009 ORTHO05D010098 4.9e-07 58.2 39 69.2
C04p51390 Brassica napus HOM05D010752 ORTHO05D010098 6.4e-07 57.8 104 40.4
BolC4t26731H Brassica oleracea HOM05D010752 ORTHO05D010098 6.4e-07 57.8 104 40.4
A04p16810 Brassica napus HOM05D010752 ORTHO05D010098 8.3e-07 57.4 104 40.4
Gohir.D11G220566 Gossypium hirsutum HOM05D010859 ORTHO05D010098 8.3e-07 57.4 39 71.8
Phvul.001G252600 Phaseolus vulgaris HOM05D016009 ORTHO05D010098 8.3e-07 57.4 59 54.2
BcaC02g08672 Brassica carinata HOM05D010752 ORTHO05D010098 1.1e-06 57.0 102 40.2
Nn5g30088 Nelumbo nucifera HOM05D019770 ORTHO05D010098 1.4e-06 56.6 45 64.4
Prupe.6G188500 Prunus persica HOM05D010024 ORTHO05D010098 1.4e-06 56.6 47 66.0
Rhsim10G0164400 Rhododendron simsii HOM05D010024 ORTHO05D010098 1.4e-06 56.6 46 58.7
EL10Ac6g15118 Beta vulgaris HOM05D033517 ORTHO05D010098 1.9e-06 56.2 109 34.9
Dinv21891 Davidia involucrata HOM05D010024 ORTHO05D011647 1.9e-06 56.2 47 61.7
Cpa.g.sc752.3 Carica papaya HOM05D010752 ORTHO05D010098 2.4e-06 55.8 41 70.7
ClCG01G018710 Citrullus lanatus HOM05D036945 ORTHO05D034750 2.4e-06 55.8 45 57.8
Dinv21893 Davidia involucrata HOM05D010024 ORTHO05D010098 2.4e-06 55.8 45 62.2
Dinv08833 Davidia involucrata HOM05D010024 ORTHO05D011647 5.4e-06 54.7 45 62.2
Thhalv10000443m.g Eutrema salsugineum HOM05D010752 ORTHO05D010098 7.1e-06 54.3 40 65.0
COL.COLO4_27260 Corchorus olitorius HOM05D010859 ORTHO05D034879 9.2e-06 53.9 69 44.9
Sed0011531 Sechium edule HOM05D015543 ORTHO05D010098 9.2e-06 53.9 44 61.4
Sed0023227 Sechium edule HOM05D015543 ORTHO05D010098 9.2e-06 53.9 62 45.2


User provided reference genes

Program Settings