Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10027088m.g Citrus clementina HOM05D001749 ORTHO05D001632 1.3e-152 543.1 284 100.0
Cpa.g.sc1139.1 Carica papaya HOM05D001749 ORTHO05D001632 1.1e-10 71.6 277 28.5
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 4.1e-10 69.7 269 26.4
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 4.1e-10 69.7 269 26.4
BcaC04g23126 Brassica carinata HOM05D001749 ORTHO05D001632 7.0e-10 68.9 281 28.8
BolC9t54075H Brassica oleracea HOM05D001749 ORTHO05D001632 7.0e-10 68.9 281 28.8
Sp2g30290 Schrenkiella parvula HOM05D001749 ORTHO05D001632 9.1e-10 68.6 261 28.4
CANSAT01G2116 Cannabis sativa HOM05D001749 ORTHO05D001632 3.5e-09 66.6 279 29.0
Aa31LG1G14960 Aethionema arabicum HOM05D001749 ORTHO05D001632 5.9e-09 65.9 279 25.8
AT5G66440 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 5.9e-09 65.9 284 26.1
BcaB02g10030 Brassica carinata HOM05D001749 ORTHO05D001632 7.7e-09 65.5 262 28.2
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 7.7e-09 65.5 259 26.6
THA.LOC104826664 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 7.7e-09 65.5 277 27.4
CARHR281310 Cardamine hirsuta HOM05D001749 ORTHO05D001632 1.0e-08 65.1 282 27.0
Sp5g11300 Schrenkiella parvula HOM05D001749 ORTHO05D001632 1.0e-08 65.1 278 27.7
Ah.03g141140 Amaranthus hybridus HOM05D001749 ORTHO05D001632 1.7e-08 64.3 252 27.4
Carub.0008s2808 Capsella rubella HOM05D001749 ORTHO05D001632 2.9e-08 63.5 276 27.2
Thhalv10004766m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 2.9e-08 63.5 290 27.2
THA.LOC104819200 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 3.8e-08 63.2 277 26.7
Gohir.A12G063300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 5.0e-08 62.8 280 27.9
TWI73G0715 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 6.5e-08 62.4 272 26.1
Potri.007G021500 Populus trichocarpa HOM05D001749 ORTHO05D001632 2.5e-07 60.5 276 23.9
AL8G45100 Arabidopsis lyrata HOM05D001749 ORTHO05D001632 3.2e-07 60.1 292 27.1
BcaNung05716 Brassica carinata HOM05D001749 ORTHO05D001632 4.2e-07 59.7 284 27.1
C08p26160 Brassica napus HOM05D001749 ORTHO05D001632 4.2e-07 59.7 278 26.6
BcaC07g39561 Brassica carinata HOM05D001749 ORTHO05D001632 9.4e-07 58.5 278 26.6
BolC8t50232H Brassica oleracea HOM05D001749 ORTHO05D001632 1.6e-06 57.8 280 26.8
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 1.6e-06 57.8 266 26.7
C09p11860 Brassica napus HOM05D001749 ORTHO05D001632 2.1e-06 57.4 268 24.6
DCAR_025960 Daucus carota HOM05D001749 ORTHO05D001632 2.1e-06 57.4 283 26.5
Solyc02g084960.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 2.1e-06 57.4 252 26.2
Gorai.008G066400 Gossypium raimondii HOM05D001749 ORTHO05D001632 2.7e-06 57.0 280 26.8
BraA09t36645Z Brassica rapa HOM05D001749 ORTHO05D001632 3.6e-06 56.6 267 24.0
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 3.6e-06 56.6 280 26.8
A07p17520 Brassica napus HOM05D001749 ORTHO05D001632 4.7e-06 56.2 271 27.3
BraA07t29472Z Brassica rapa HOM05D001749 ORTHO05D001632 4.7e-06 56.2 271 27.3
Manes.02G096700 Manihot esculenta HOM05D001749 ORTHO05D001632 4.7e-06 56.2 285 24.6
Sabra07G0018500 Salix brachista HOM05D001749 ORTHO05D001632 4.7e-06 56.2 281 24.6
Sopen02g029630 Solanum pennellii HOM05D001749 ORTHO05D001632 4.7e-06 56.2 252 25.8
BraA09t39862Z Brassica rapa HOM05D001749 ORTHO05D001632 6.1e-06 55.8 276 26.8
C07p25470 Brassica napus HOM05D001749 ORTHO05D001632 8.0e-06 55.5 274 28.1
Nitab4.5_0001617g0020 Nicotiana tabacum HOM05D001749 ORTHO05D001632 8.0e-06 55.5 140 30.7
Sabra05G0099000 Salix brachista HOM05D001749 ORTHO05D001632 8.0e-06 55.5 269 23.4


User provided reference genes

Program Settings