Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10026867m.g Citrus clementina HOM05D008671 ORTHO05D010581 9.8e-37 156.4 84 100.0
Atru.chr1.4157 Acer truncatum HOM05D008671 ORTHO05D010581 1.9e-16 89.0 85 64.7
Manes.11G012400 Manihot esculenta HOM05D008671 ORTHO05D010581 7.6e-13 77.0 85 56.5
QL05p000866 Quercus lobata HOM05D008671 ORTHO05D010581 9.9e-13 76.6 79 59.5
QL05p001127 Quercus lobata HOM05D008671 ORTHO05D010581 9.9e-13 76.6 79 59.5
COL.COLO4_30872 Corchorus olitorius HOM05D008671 ORTHO05D010581 1.7e-12 75.9 85 52.9
Manes.04G151200 Manihot esculenta HOM05D008671 ORTHO05D010581 2.9e-12 75.1 84 56.0
CiPaw.01G211300 Carya illinoinensis HOM05D008671 ORTHO05D010581 1.9e-11 72.4 81 55.6
Potri.001G162300 Populus trichocarpa HOM05D008671 ORTHO05D010581 1.9e-11 72.4 83 59.0
Potri.003G073050 Populus trichocarpa HOM05D008671 ORTHO05D010581 2.4e-11 72.0 83 56.6
Thecc.06G130600 Theobroma cacao HOM05D008671 ORTHO05D010581 5.4e-11 70.9 85 54.1
FvH4_6g35870 Fragaria vesca HOM05D008671 ORTHO05D010581 9.2e-11 70.1 81 50.6
FAN02G1967 Fragaria x ananassa HOM05D008671 ORTHO05D010581 1.2e-10 69.7 81 51.9
FAN05G1480 Fragaria x ananassa HOM05D008671 ORTHO05D010581 1.2e-10 69.7 81 51.9
Sabra03G0043800 Salix brachista HOM05D008671 ORTHO05D010581 2.7e-10 68.6 83 54.2
FAN14G4480 Fragaria x ananassa HOM05D008671 ORTHO05D010581 6.0e-10 67.4 80 50.0
Duzib235G0704 Durio zibethinus HOM05D008671 ORTHO05D010581 1.0e-09 66.6 83 51.8
Lj1g0013517 Lotus japonicus HOM05D008671 ORTHO05D010581 3.0e-09 65.1 83 51.8
Cpa.g.sc25.197 Carica papaya HOM05D008671 ORTHO05D010581 8.7e-09 63.5 84 46.4
Haze_16139 Corylus avellana HOM05D008671 ORTHO05D010581 8.7e-09 63.5 81 48.1
MD09G1172400 Malus domestica HOM05D008671 ORTHO05D010581 1.5e-08 62.8 88 43.2
Nitab4.5_0006338g0120 Nicotiana tabacum HOM05D008671 ORTHO05D010581 1.5e-08 62.8 80 50.0
Prupe.3G030800 Prunus persica HOM05D008671 ORTHO05D010581 4.3e-08 61.2 85 45.9
Glyma.19G262200 Glycine max HOM05D008671 ORTHO05D010581 5.6e-08 60.8 85 47.1
Phvul.009G261500 Phaseolus vulgaris HOM05D008671 ORTHO05D010581 9.6e-08 60.1 81 48.1
Sopen03g041420 Solanum pennellii HOM05D008671 ORTHO05D010581 2.1e-07 58.9 82 51.2
Solyc03g123650.3 Solanum lycopersicum HOM05D008671 ORTHO05D010581 6.2e-07 57.4 82 50.0


User provided reference genes

Program Settings