Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 6.2e-45 183.7 91 100.0
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 9.0e-28 126.7 94 73.4
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 6.5e-18 94.0 90 57.8
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 1.2e-16 89.7 84 56.0
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 6.1e-16 87.4 85 58.8
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 2.3e-15 85.5 87 55.2
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 1.1e-14 83.2 88 55.7
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 1.3e-13 79.7 84 48.8
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 2.2e-13 79.0 90 46.7
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 8.2e-13 77.0 81 54.3
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 1.8e-12 75.9 94 46.8
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 1.8e-12 75.9 87 49.4
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 1.8e-12 75.9 82 48.8
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 2.4e-12 75.5 90 44.4
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 5.3e-12 74.3 87 47.1
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 9.1e-12 73.6 89 49.4
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 9.1e-12 73.6 85 51.8
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 9.1e-12 73.6 90 46.7
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 9.1e-12 73.6 88 43.2
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 9.1e-12 73.6 92 45.7
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 2.6e-11 72.0 87 44.8
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 2.6e-11 72.0 81 48.1
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 5.9e-11 70.9 64 60.9
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 5.9e-11 70.9 87 49.4
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.9e-10 68.6 79 46.8
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 5.0e-10 67.8 83 42.2
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 5.0e-10 67.8 88 44.3
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 6.5e-10 67.4 95 45.3
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 8.5e-10 67.0 96 45.8
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 1.4e-09 66.2 77 44.2
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.9e-09 65.9 88 44.3
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 2.5e-09 65.5 90 40.0
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 2.5e-09 65.5 84 45.2
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 3.2e-09 65.1 74 44.6
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 5.5e-09 64.3 95 43.2
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 7.2e-09 63.9 67 49.3
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 9.4e-09 63.5 96 43.8
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 9.4e-09 63.5 95 44.2
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 1.2e-08 63.2 90 40.0
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 1.6e-08 62.8 84 41.7
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 1.6e-08 62.8 83 44.6
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 1.6e-08 62.8 57 47.4
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 6.1e-08 60.8 81 38.3
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 7.9e-08 60.5 91 37.4
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 1.4e-07 59.7 32 68.8
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.3e-07 58.9 39 59.0
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 8.8e-07 57.0 45 55.6
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 1.1e-06 56.6 39 53.8
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 1.1e-06 56.6 83 38.6
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 1.5e-06 56.2 93 40.9
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 3.3e-06 55.1 87 40.2
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 5.7e-06 54.3 87 40.2
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 9.7e-06 53.5 35 60.0


User provided reference genes

Program Settings